RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 NR3C1P04150 777 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 USP46P62068 366 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 COG2Q14746 738 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 CBWD6Q4V339 395 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 CBWD3Q5JTY5 395 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 CBWD5Q5RIA9 395 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 SEL1L2Q5TEA6 688 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 CCDC174Q6PII3 467 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 RNF207Q6ZRF8 634 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 HS2ST1Q7LGA3 356 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 RFWD2Q8NHY2 731 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 STARD13Q9Y3M8 1113 aa17.28■□□□□ 0.36
LINC00554-201ENST00000564841 SPDYE2BA6NHP3 402 aa17.27■□□□□ 0.36
LINC00554-201ENST00000564841 FOXN3O00409 490 aaPredicted RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 HNRNPRO43390 633 aaKnown RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 ATP5HO75947 161 aa17.27■□□□□ 0.36
LINC00554-201ENST00000564841 EGFRP00533 1210 aa17.27■□□□□ 0.36
LINC00554-201ENST00000564841 SPDYE6P0CI01 402 aa17.27■□□□□ 0.36
LINC00554-201ENST00000564841 LMNB1P20700 586 aa17.27■□□□□ 0.36
LINC00554-201ENST00000564841 TPP2P29144 1249 aaPredicted RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 THOC5Q13769 683 aaKnown RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 KNOP1Q1ED39 458 aaKnown RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 GPATCH4Q5T3I0 446 aaKnown RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 DNAJC1Q96KC8 554 aaKnown RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 TIPINQ9BVW5 301 aa17.27■□□□□ 0.36
LINC00554-201ENST00000564841 FBXO6Q9NRD1 293 aaPredicted RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 ZNF70Q9UC06 446 aaPredicted RBP17.27■□□□□ 0.36
LINC00554-201ENST00000564841 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.27■□□□□ 0.35
LINC00554-201ENST00000564841 PSMG1O95456 288 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 SNHG28P0DPA3 235 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 SLC34A1Q06495 639 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 DYNC1I2Q13409 638 aaKnown RBP17.27■□□□□ 0.35
LINC00554-201ENST00000564841 DAB2IPQ5VWQ8 1189 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 CLNKQ7Z7G1 428 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 PHLDB2Q86SQ0 1253 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 UBL4BQ8N7F7 174 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 ELMO3Q96BJ8 720 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 CYTH2Q99418 400 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 SPATA16Q9BXB7 569 aa17.27■□□□□ 0.35
LINC00554-201ENST00000564841 MMADHCQ9H3L0 296 aaPredicted RBP17.27■□□□□ 0.35
LINC00554-201ENST00000564841 DIS3Q9Y2L1 958 aaKnown RBP17.27■□□□□ 0.35
LINC00554-201ENST00000564841 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.27■□□□□ 0.35
LINC00554-201ENST00000564841 USP1O94782 785 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 PKN2Q16513 984 aaKnown RBP17.26■□□□□ 0.35
LINC00554-201ENST00000564841 CTC1Q2NKJ3 1217 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 EDRF1Q3B7T1 1238 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 RINLQ6ZS11 566 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 FBXO41Q8TF61 875 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 GLIS2Q9BZE0 524 aaPredicted RBP17.26■□□□□ 0.35
LINC00554-201ENST00000564841 ZWILCHQ9H900 591 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00554-201ENST00000564841 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 A0A0G2JND7 137 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 GSC2O15499 205 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 EDF1O60869 148 aaKnown RBP17.26■□□□□ 0.35
LINC00554-201ENST00000564841 ATP5DP30049 168 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 OCRLQ01968 901 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 CXCL9Q07325 125 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 LRRC36Q1X8D7 754 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 TMEM179Q6ZVK1 233 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 RTKN2Q8IZC4 609 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 AZIN2Q96A70 460 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 GRAMD1AQ96CP6 724 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 SH2D3AQ9BRG2 576 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 SYT11Q9BT88 431 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 RUSC1Q9BVN2 902 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 PHF24Q9UPV7 400 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 A0A1W2PPM1 405 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 GSTTP1A0A1W2PQM5 241 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 ANKRD62A6NC57 917 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 SPOPO43791 374 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 ZBED4O75132 1171 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 DCTN3O75935 186 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 OR6B1O95007 311 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 GSTA2P09210 222 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 DGKZQ13574 1117 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 R3HDM1Q15032 1099 aaKnown RBP17.26■□□□□ 0.35
LINC00554-201ENST00000564841 PRAMEF18Q5VWM3 479 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 RHBDF2Q6PJF5 856 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 CATSPER3Q86XQ3 398 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 REEP2Q9BRK0 252 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 LRRC27Q9C0I9 530 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 FZD1Q9UP38 647 aa17.26■□□□□ 0.35
LINC00554-201ENST00000564841 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.26■□□□□ 0.35
LINC00554-201ENST00000564841 ASTN1O14525 1302 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 ATP6V1G1O75348 118 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 IVDP26440 423 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 ADCY8P40145 1251 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 PIK3CAP42336 1068 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 BPIFB4P59827 614 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 TTC7BQ86TV6 843 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 ZC3H3Q8IXZ2 948 aaKnown RBP17.25■□□□□ 0.35
LINC00554-201ENST00000564841 FBXO27Q8NI29 283 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 SH3TC2Q8TF17 1288 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 PLEKHG4BQ96PX9 1271 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 PKD2L1Q9P0L9 805 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 GCNT3O95395 438 aa17.25■□□□□ 0.35
LINC00554-201ENST00000564841 SGO2Q562F6 1265 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms