RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 HLA-DRAP01903 254 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 MYBL1P10243 752 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 GARTP22102 1010 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 SSR1P43307 286 aaKnown RBP16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 CAV1Q03135 178 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 SWSAP1Q6NVH7 229 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 TBC1D31Q96DN5 1066 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 WNK4Q96J92 1243 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 OSBPL8Q9BZF1 889 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 RIPK3Q9Y572 518 aa16.45■□□□□ 0.22
GTF3C1-205ENST00000564747 ZC3H11AO75152 810 aaKnown RBP eCLIP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 SUN1O94901 812 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 ACOT2P49753 483 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 KCNJ2P63252 427 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 MAP3K10Q02779 954 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 BAATQ14032 418 aaPredicted RBP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 CCNG2Q16589 344 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 WDR44Q5JSH3 913 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 TDRD10Q5VZ19 366 aaKnown RBP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 IZUMO3Q5VZ72 239 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 C17orf75Q9HAS0 396 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 MAP3K20Q9NYL2 800 aaKnown RBP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 TCEA3O75764 348 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 NCALDP61601 193 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 MAMLD1Q13495 774 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 GALNTL6Q49A17 601 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 ATP13A4Q4VNC1 1196 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 TMEM63BQ5T3F8 832 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 LPAR1Q92633 364 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 TRIM11Q96F44 468 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 TGS1Q96RS0 853 aaKnown RBP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 FNBP1Q96RU3 617 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 ECT2Q9H8V3 914 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 PDLIM7Q9NR12 457 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 ADAM22Q9P0K1 906 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 CTDP1Q9Y5B0 961 aaPredicted RBP16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
GTF3C1-205ENST00000564747 WNT10BO00744 389 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 HGSO14964 777 aaPredicted RBP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 STX2P32856 288 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 NLRP11P59045 1033 aaKnown RBP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 ZACNQ401N2 412 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 SPATA21Q7Z572 469 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 RHOT1Q8IXI2 618 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 CCDC89Q8N998 374 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 FAM212AQ96EL1 285 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 KLHL11Q9NVR0 708 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 VNN1O95497 513 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 C4BPAP04003 597 aaKnown RBP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 NR3C2P08235 984 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 ACO1P21399 889 aaKnown RBP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 PIK3CAP42336 1068 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 BPIFB4P59827 614 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 PTP4A2Q12974 167 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 CGB2Q6NT52 195 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 CYP4F22Q6NT55 531 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 TMEM270Q6UE05 265 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 GSTA5Q7RTV2 222 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 VSIG10LQ86VR7 867 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 GLIS1Q8NBF1 620 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 KIAA1683Q9H0B3 1180 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 APOBEC3GQ9HC16 384 aaKnown RBP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 SEPT9Q9UHD8 586 aaPredicted RBP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 COL4A5P29400 1685 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 GSTTP1A0A1W2PQM5 241 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 EXTL3O43909 919 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 CDH16O75309 829 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 LIG4P49917 911 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 NOMO3P69849 1222 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 FITM2Q8N6M3 262 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 RBM15Q96T37 977 aaKnown RBP eCLIP16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 ARHGAP28Q9P2N2 729 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 LGALS13Q9UHV8 139 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 PCDHB4Q9Y5E5 795 aa16.43■□□□□ 0.22
GTF3C1-205ENST00000564747 CFAP73A6NFT4 308 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 PI4K2BG5E9Z4 385 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 DGAT1O75907 488 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 KRT10P13645 584 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 NQO1P15559 274 aaKnown RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 P3H1Q32P28 736 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 KAZNQ674X7 775 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 ZBTB45Q96K62 511 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 RMDN2Q96LZ7 410 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 POLR3FQ9H1D9 316 aaPredicted RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 ATP6V0A4Q9HBG4 840 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 ARL2BPQ9Y2Y0 163 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 TLR3O15455 904 aaKnown RBP16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 RGS20O76081 388 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 TCF4P15884 667 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 KLRC2P26717 231 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 CLDN10P78369 228 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 BNIP1Q12981 228 aa16.42■□□□□ 0.22
GTF3C1-205ENST00000564747 MTMR2Q13614 643 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms