RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 NOMO2Q5JPE7 1267 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 ZKSCAN2Q63HK3 967 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 ZGPATQ8N5A5 531 aaKnown RBP5.79□□□□□ -1.48
CHD9-212ENST00000564641 OR2I1PQ8NGU4 316 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 TBC1D15Q8TC07 691 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 COG1Q8WTW3 980 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 HDAC10Q969S8 669 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 SEMA4GQ9NTN9 838 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 TDP1Q9NUW8 608 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 FOXJ2Q9P0K8 574 aa5.79□□□□□ -1.48
CHD9-212ENST00000564641 SALL3Q9BXA9 1300 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 A0A1W2PS29 197 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 SGTAO43765 313 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 FOLR3P41439 243 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 CDC42EP1Q00587 391 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 CLUL1Q15846 466 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 RSPH3Q86UC2 560 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 NRG4Q8WWG1 115 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
CHD9-212ENST00000564641 IGLV2-14P01704 120 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 RPLP2P05387 115 aaKnown RBP5.77□□□□□ -1.49
CHD9-212ENST00000564641 SRGNP10124 158 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 ZNF37AP17032 561 aaPredicted RBP5.77□□□□□ -1.49
CHD9-212ENST00000564641 SLFN5Q08AF3 891 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 NBPF8Q3BBV2 869 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 PABPC1LQ4VXU2 614 aaKnown RBP5.77□□□□□ -1.49
CHD9-212ENST00000564641 ZNF362Q5T0B9 420 aaPredicted RBP5.77□□□□□ -1.49
CHD9-212ENST00000564641 GRASPQ7Z6J2 395 aaPredicted RBP5.77□□□□□ -1.49
CHD9-212ENST00000564641 CLNKQ7Z7G1 428 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 CNTD1Q8N815 330 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 IL17RDQ8NFM7 739 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 DPF2Q92785 391 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 SLC2A13Q96QE2 648 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 INTS13Q9NVM9 706 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 SLC5A4Q9NY91 659 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 HSFX1Q9UBD0 423 aa5.77□□□□□ -1.49
CHD9-212ENST00000564641 PRAMEF33A0A0G2JMD5 474 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 CCDC78A2IDD5 438 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 MPPED1O15442 326 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 PRAMEF10O60809 474 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 FCER1AP12319 257 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 IL12RB1P42701 662 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 RPS7P62081 194 aaKnown RBP5.76□□□□□ -1.49
CHD9-212ENST00000564641 ZNF844Q08AG5 666 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 GEN1Q17RS7 908 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 PPP4R3AQ6IN85 833 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 AOPEPQ8N6M6 819 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 PPM1NQ8N819 430 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 Q8NA96 180 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 MKS1Q9NXB0 559 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 JKAMPQ9P055 326 aa5.76□□□□□ -1.49
CHD9-212ENST00000564641 DCAF1Q9Y4B6 1507 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 UNC13AQ9UPW8 1703 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 YY2O15391 372 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 PROM1O43490 865 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 NDUFS2O75306 463 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 KCNA2P16389 499 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 PTH2RP49190 550 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 KRT85P78386 507 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 RAB39AQ14964 217 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 INAVAQ3KP66 663 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 EGFLAMQ63HQ2 1017 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 KIAA0895LQ68EN5 471 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 PGM2L1Q6PCE3 622 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 TMX3Q96JJ7 454 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 PACSIN1Q9BY11 444 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.75□□□□□ -1.49
CHD9-212ENST00000564641 MRFAP1Q9Y605 127 aa5.75□□□□□ -1.49
CHD9-212ENST00000564641 COL11A2P13942 1736 aaPredicted RBP5.74□□□□□ -1.49
CHD9-212ENST00000564641 KLHL33A6NCF5 533 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 GRM6O15303 877 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 ZFPL1O95159 310 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 ANXA1P04083 346 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 POU3F3P20264 500 aaPredicted RBP5.74□□□□□ -1.49
CHD9-212ENST00000564641 SOX10P56693 466 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 FPGSQ05932 587 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 PIGFQ07326 219 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 UTP14CQ5TAP6 766 aaKnown RBP5.74□□□□□ -1.49
CHD9-212ENST00000564641 LRCH2Q5VUJ6 765 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 VWA1Q6PCB0 445 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.74□□□□□ -1.49
CHD9-212ENST00000564641 C1orf162Q8NEQ5 155 aaPredicted RBP5.74□□□□□ -1.49
CHD9-212ENST00000564641 IFI44Q8TCB0 444 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 UROC1Q96N76 676 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 TIMP4Q99727 224 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 SPC25Q9HBM1 224 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 MAN1C1Q9NR34 630 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 CALCOCO1Q9P1Z2 691 aa5.74□□□□□ -1.49
CHD9-212ENST00000564641 AGFG2O95081 481 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 SF3B3Q15393 1217 aaKnown RBP5.73□□□□□ -1.49
CHD9-212ENST00000564641 KAZNQ674X7 775 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 ARHGEF25Q86VW2 580 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 DCBLD1Q8N8Z6 715 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 ZNF384Q8TF68 577 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 PGBD1Q96JS3 809 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 ATP8A1Q9Y2Q0 1164 aa5.73□□□□□ -1.49
CHD9-212ENST00000564641 E7ENX8 843 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 INO80B-WBP1J3KQ70 363 aa5.72□□□□□ -1.49
CHD9-212ENST00000564641 SLC43A1O75387 559 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms