RNA–Protein interactions for RNA: ENST00000564317.5

CDH11-209, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-209ENST00000564317 FAN1Q9Y2M0 1017 aa16.75■□□□□ 0.27
CDH11-209ENST00000564317 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.75■□□□□ 0.27
CDH11-209ENST00000564317 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
CDH11-209ENST00000564317 SPTLC1O15269 473 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 STX10O60499 249 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 LRRN2O75325 713 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 CST3P01034 146 aaPredicted RBP16.74■□□□□ 0.27
CDH11-209ENST00000564317 AFPP02771 609 aaKnown RBP16.74■□□□□ 0.27
CDH11-209ENST00000564317 ALDH2P05091 517 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 KRT19P08727 400 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 FMO5P49326 533 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 ALDH7A1P49419 539 aaKnown RBP16.74■□□□□ 0.27
CDH11-209ENST00000564317 ERVK-21P61565 698 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 MAN2A1Q16706 1144 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 DCLRE1AQ6PJP8 1040 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 TAS1R2Q8TE23 839 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 IGSF21Q96ID5 467 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
CDH11-209ENST00000564317 TUBGCP2Q9BSJ2 902 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 VN1R3Q9BXE9 311 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 RBSNQ9H1K0 784 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 CERS4Q9HA82 394 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 AAASQ9NRG9 546 aa16.74■□□□□ 0.27
CDH11-209ENST00000564317 LIMA1Q9UHB6 759 aaKnown RBP16.74■□□□□ 0.27
CDH11-209ENST00000564317 EPOPA6NHQ4 379 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 TMEM189-UBE2V1I3L0A0 370 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 PHACTR2O75167 634 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 B3GAT3O94766 335 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 PRKCSHP14314 528 aaPredicted RBP16.73■□□□□ 0.27
CDH11-209ENST00000564317 BRCC3P46736 316 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 MYL6P60660 151 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 RBP5P82980 135 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 MYL7Q01449 175 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 KRT39Q6A163 491 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 KLHL23Q8NBE8 558 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 SEMA4DQ92854 862 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 COLEC11Q9BWP8 271 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 SLC28A3Q9HAS3 691 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 SPG21Q9NZD8 308 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 RWDD3Q9Y3V2 267 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 PCDHB12Q9Y5F1 795 aa16.73■□□□□ 0.27
CDH11-209ENST00000564317 NLRC5Q86WI3 1866 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 C5orf67F2Z3F1 127 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 GOLGA6L19H0YKK7 550 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 I3L4J1 428 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 FGF18O76093 207 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 EFEMP2O95967 443 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 PIK3CAP42336 1068 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 AARSP49588 968 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDH11-209ENST00000564317 COPB1P53618 953 aaKnown RBP16.72■□□□□ 0.27
CDH11-209ENST00000564317 NCOA4Q13772 614 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 VWA3BQ502W6 1294 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 LRRC52Q8N7C0 313 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 SAMD11Q96NU1 681 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 ANP32EQ9BTT0 268 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 PLVAPQ9BX97 442 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 XYLT2Q9H1B5 865 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 VPS16Q9H269 839 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDH11-209ENST00000564317 ADAM28Q9UKQ2 775 aa16.72■□□□□ 0.27
CDH11-209ENST00000564317 PMM2O15305 246 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 N4BP1O75113 896 aaKnown RBP16.71■□□□□ 0.27
CDH11-209ENST00000564317 TADA2AO75478 443 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
CDH11-209ENST00000564317 PPM1AP35813 382 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 TAF6P49848 677 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 LILRA4P59901 499 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 TRPC3Q13507 836 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 TIGD5Q53EQ6 642 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 FUT10Q6P4F1 479 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 RNF168Q8IYW5 571 aaPredicted RBP16.71■□□□□ 0.27
CDH11-209ENST00000564317 FBXO22Q8NEZ5 403 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 ARNTL2Q8WYA1 636 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 HPDLQ96IR7 371 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 ZNF560Q96MR9 790 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 PI4K2AQ9BTU6 479 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 GPR62Q9BZJ7 368 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 NDST4Q9H3R1 872 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 COQ4Q9Y3A0 265 aa16.71■□□□□ 0.27
CDH11-209ENST00000564317 LRRC10BA6NIK2 292 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 RB1P06400 928 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 TPM4P67936 248 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 PLCB3Q01970 1234 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 SPOPLQ6IQ16 392 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 TAS1R1Q7RTX1 841 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 FBXL13Q8NEE6 735 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 LMO3Q8TAP4 145 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 TMEM169Q96HH4 297 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 TTYH1Q9H313 450 aaPredicted RBP16.7■□□□□ 0.26
CDH11-209ENST00000564317 ZNF576Q9H609 170 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 APOBEC3GQ9HC16 384 aaKnown RBP16.7■□□□□ 0.26
CDH11-209ENST00000564317 ALG13Q9NP73 1137 aaKnown RBP16.7■□□□□ 0.26
CDH11-209ENST00000564317 RAB20Q9NX57 234 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
CDH11-209ENST00000564317 SCN1AP35498 2009 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms