RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 TRIP11Q15643 1979 aa18.29■□□□□ 0.52
CMTM3-208ENST00000564247 ATG2AQ2TAZ0 1938 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 GTPBP10A4D1E9 387 aaKnown RBP18.28■□□□□ 0.52
CMTM3-208ENST00000564247 TBKBP1A7MCY6 615 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 PMM2O15305 246 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 C4BPAP04003 597 aaKnown RBP18.28■□□□□ 0.52
CMTM3-208ENST00000564247 FGFR1P11362 822 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 KCNE1P15382 129 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 WNT7BP56706 349 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 XKR4Q5GH76 650 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 LMBRD2Q68DH5 695 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-208ENST00000564247 GLB1LQ6UWU2 654 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 AGMOQ6ZNB7 445 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 SV2AQ7L0J3 742 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 ZNF516Q92618 1163 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 GAD1Q99259 594 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 TMEM117Q9H0C3 514 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 RNF19AQ9NV58 838 aa18.28■□□□□ 0.52
CMTM3-208ENST00000564247 UBQLN1Q9UMX0 589 aaKnown RBP18.28■□□□□ 0.52
CMTM3-208ENST00000564247 ANK1P16157 1881 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 SMIM28A0A1B0GU29 152 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 A0A1W2PQC6 194 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 ARL5CA6NH57 179 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 ATF7P17544 494 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-208ENST00000564247 TRPC3Q13507 836 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 EXOC3L4Q17RC7 722 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 CBWD6Q4V339 395 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 TIGD5Q53EQ6 642 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 CBWD3Q5JTY5 395 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 CBWD5Q5RIA9 395 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 TRAPPC11Q7Z392 1133 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 CCDC150Q8NCX0 1101 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 EHBP1Q8NDI1 1231 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 URGCPQ8TCY9 931 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 CASD1Q96PB1 797 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 ERGIC2Q96RQ1 377 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 SLC38A7Q9NVC3 462 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 COG5Q9UP83 839 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 PLAGL2Q9UPG8 496 aa18.27■□□□□ 0.52
CMTM3-208ENST00000564247 MYO7AQ13402 2215 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 BRWD1Q9NSI6 2320 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 DLL1O00548 723 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 GRM6O15303 877 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 MEFVO15553 781 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-208ENST00000564247 OFD1O75665 1012 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 THP07101 528 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 NFICP08651 508 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 CYP3A5P20815 502 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 MLH1P40692 756 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 MRPS5P82675 430 aaKnown RBP18.26■□□□□ 0.51
CMTM3-208ENST00000564247 SYCP1Q15431 976 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 ZACNQ401N2 412 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 TJAP1Q5JTD0 557 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-208ENST00000564247 EFCAB13Q8IY85 973 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 FBXL13Q8NEE6 735 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 OR5B17Q8NGF7 314 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 RSPH1Q8WYR4 309 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 ASB2Q96Q27 587 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 CRACR2AQ9BSW2 395 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 MTMR12Q9C0I1 747 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 AAASQ9NRG9 546 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 DPP3Q9NY33 737 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 CUL9Q8IWT3 2517 aa18.26■□□□□ 0.51
CMTM3-208ENST00000564247 PLXNA4Q9HCM2 1894 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 MEIS3P2A8K0S8 358 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 CDC25BP30305 580 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 ZBTB6Q15916 424 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 WDR44Q5JSH3 913 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 GLRA4Q5JXX5 417 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 CLLU1OSQ5K130 101 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 SPOUT1Q5T280 376 aaKnown RBP18.25■□□□□ 0.51
CMTM3-208ENST00000564247 C15orf39Q6ZRI6 1047 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 VSTM4Q8IW00 320 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 LRRC43Q8N309 656 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 KLHL23Q8NBE8 558 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 HELQQ8TDG4 1101 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 HLA-CQ95604 372 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 ZFP42Q96MM3 310 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 ZMAT2Q96NC0 199 aaKnown RBP18.25■□□□□ 0.51
CMTM3-208ENST00000564247 NUP58Q9BVL2 599 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 COL25A1Q9BXS0 654 aaPredicted RBP18.25■□□□□ 0.51
CMTM3-208ENST00000564247 NSUN3Q9H649 340 aaKnown RBP18.25■□□□□ 0.51
CMTM3-208ENST00000564247 CWH43Q9H720 699 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 ALG13Q9NP73 1137 aaKnown RBP18.25■□□□□ 0.51
CMTM3-208ENST00000564247 RAB20Q9NX57 234 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 ITGA11Q9UKX5 1188 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 INPP5FQ9Y2H2 1132 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 COQ4Q9Y3A0 265 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 PCDHB12Q9Y5F1 795 aa18.25■□□□□ 0.51
CMTM3-208ENST00000564247 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.25■□□□□ 0.51
CMTM3-208ENST00000564247 PTPRJQ12913 1337 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 CLSTN1O94985 981 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 HLA-DRAP01903 254 aa18.24■□□□□ 0.51
CMTM3-208ENST00000564247 ITGB1P05556 798 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms