RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 NMD3Q96D46 503 aaKnown RBP13.3□□□□□ -0.28
COMMD4-209ENST00000564068 PWWP2AQ96N64 755 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 TBC1D10AQ9BXI6 508 aa13.3□□□□□ -0.28
COMMD4-209ENST00000564068 K7ERI5 159 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 PRPSAP2O60256 369 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 UNC5CO95185 931 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 NTSR2O95665 410 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 SLC1A1P43005 524 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 C4orf32Q8N8J7 132 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 MKNK1Q9BUB5 465 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 WHRNQ9P202 907 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 ATXN2Q99700 1313 aaKnown RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 EEF1B2P24534 225 aaKnown RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 GARSP41250 739 aaKnown RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 PTDSS1P48651 473 aaKnown RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 PTK7Q13308 1070 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 NFIXQ14938 502 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 KPNB1Q14974 876 aaKnown RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 CXorf38Q8TB03 319 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 ATP6V0A1Q93050 837 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 RNF34Q969K3 372 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 KIAA1683Q9H0B3 1180 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 IP6K2Q9UHH9 426 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 LRCH1Q9Y2L9 728 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 ADAMTSL3P82987 1691 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 ARHGAP10A1A4S6 786 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 MYL2P10916 166 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 MMP13P45452 471 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 DUPD1Q68J44 220 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 ISLR2Q6UXK2 745 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 CKAP2Q8WWK9 683 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 MMTAG2Q9BU76 263 aaKnown RBP13.29□□□□□ -0.28
COMMD4-209ENST00000564068 ACP6Q9NPH0 428 aa13.29□□□□□ -0.28
COMMD4-209ENST00000564068 A6NJR5 290 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 H0YCG3 227 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 ADCY3O60266 1144 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 GSTA2P09210 222 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DLGAP5Q15398 846 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 CEP55Q53EZ4 464 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 IRF2BP2Q7Z5L9 587 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 GALNT4Q8N4A0 578 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 PRELID2Q8N945 189 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 TTC13Q8NBP0 860 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 LINC00116Q8NCU8 138 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 MCUQ8NE86 351 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SLC7A3Q8WY07 619 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 MSTO1Q9BUK6 570 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 ARMCX1Q9P291 453 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 NR2E1Q9Y466 385 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SUPT3HO75486 399 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 EPHA7Q15375 998 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SNRNP35Q16560 246 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SLC27A3Q5K4L6 730 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 ALG3Q92685 438 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DDX50Q9BQ39 737 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 ZCWPW1Q9H0M4 648 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 CHST7Q9NS84 486 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 ETAA1Q9NY74 926 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 PIAS1O75925 651 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 P4HBP07237 508 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 PEX5P50542 639 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 RRP1BQ14684 758 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SF3B3Q15393 1217 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 PKN2Q16513 984 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DAB2IPQ5VWQ8 1189 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 RIBC1Q8N443 379 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DCAF4Q8WV16 495 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DTNBP1Q96EV8 351 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 XAB2Q9HCS7 855 aaKnown RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 MGRN1O60291 552 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 RRM1P23921 792 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DSG1Q02413 1049 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SMTNL2Q2TAL5 461 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DNAL1Q4LDG9 190 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 TMEM259Q4ZIN3 620 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SPOPLQ6IQ16 392 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 TMEM179Q6ZVK1 233 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 MCF2L2Q86YR7 1114 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 FAM149B1Q96BN6 582 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 CBWD1Q9BRT8 395 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 KLC2Q9H0B6 622 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 GANQ9H2C0 597 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 DNAJC18Q9H819 358 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 NINJ2Q9NZG7 142 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 SLC12A6Q9UHW9 1150 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 INPP5FQ9Y2H2 1132 aa13.28□□□□□ -0.28
COMMD4-209ENST00000564068 GH1P01241 217 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 NUDT17P0C025 328 aa13.27□□□□□ -0.28
COMMD4-209ENST00000564068 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.28
COMMD4-209ENST00000564068 STX3Q13277 289 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms