RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 DERAQ9Y315 318 aa16.09■□□□□ 0.17
RPUSD1-204ENST00000563560 PVALEFA0A1B0GWK0 134 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 A0A1W2PQ27 194 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 A0A1W2PQ64 194 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 A0A1W2PQD8 194 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 SYN3O14994 580 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 SPTLC1O15269 473 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 SPATA31D3P0C874 917 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 MTHFRP42898 656 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 VARS2Q5ST30 1063 aaKnown RBP16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 SPATA31D4Q6ZUB0 917 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 GLYCTKQ8IVS8 523 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 KIF12Q96FN5 646 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 BORCS6Q96GS4 357 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 PAGE5Q96GU1 130 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 C2CD2Q9Y426 696 aa16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.08■□□□□ 0.16
RPUSD1-204ENST00000563560 C2CD4DB7Z1M9 353 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 ABLIM3O94929 683 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 VNN2O95498 520 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 MATR3P43243 847 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 NDUFA8P51970 172 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 ASIC1P78348 528 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 AMPD3Q01432 767 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 POSTNQ15063 836 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 C9orf57Q5W0N0 161 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 PDXDC1Q6P996 788 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 CYP26C1Q6V0L0 522 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 CEP57Q86XR8 500 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 BRSK2Q8IWQ3 736 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 KREMEN2Q8NCW0 462 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 POMGNT1Q8WZA1 660 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 SCAND2PQ9GZW5 306 aaPredicted RBP16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 ZDHHC7Q9NXF8 308 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 EXOC7Q9UPT5 735 aa16.07■□□□□ 0.16
RPUSD1-204ENST00000563560 UBE4BO95155 1302 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 PTPRJQ12913 1337 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 CCDC195A0A1B0GUA6 201 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 TRAPPC3O43617 180 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 GPR37L1O60883 481 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 ZMYND10O75800 440 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 OAZ2O95190 189 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 POU2F2P09086 479 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 OR1D2P34982 312 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 LILRA4P59901 499 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 ROR1Q01973 937 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 BECN1Q14457 450 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 CES5AQ6NT32 575 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 ANKS3Q6ZW76 656 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 KIAA0895Q8NCT3 520 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 SAAL1Q96ER3 474 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 FAM84AQ96KN4 292 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 RPGRIP1Q96KN7 1286 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 RIPOR3Q96MK2 946 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 TMEM206Q9H813 350 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 GDPD2Q9HCC8 539 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 MUTYHQ9UIF7 546 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 USTQ9Y2C2 406 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 CDY1Q9Y6F8 540 aa16.06■□□□□ 0.16
RPUSD1-204ENST00000563560 KMT2EQ8IZD2 1858 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 WDR27A2RRH5 827 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 DCXO43602 365 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 EXTL3O43909 919 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 HOXA9P31269 272 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 AFMP43652 599 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 STK4Q13043 487 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 TMEM132DQ14C87 1099 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 ATAT1Q5SQI0 421 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 ZDHHC14Q8IZN3 488 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 TMEM174Q8WUU8 243 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 PYM1Q9BRP8 204 aaKnown RBP16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 PRKD2Q9BZL6 878 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 USP25Q9UHP3 1055 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 FBXL5Q9UKA1 691 aa16.05■□□□□ 0.16
RPUSD1-204ENST00000563560 CYP11A1P05108 521 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 PRR29P0C7W0 189 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 NT5DC4Q86YG4 428 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 C12orf56Q8IXR9 622 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 AGPAT3Q9NRZ7 376 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 ATP6V1DQ9Y5K8 247 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 PTPRDP23468 1912 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 DENND4CQ5VZ89 1909 aa16.04■□□□□ 0.16
RPUSD1-204ENST00000563560 CLUHO75153 1309 aa16.03■□□□□ 0.16
RPUSD1-204ENST00000563560 GOLGA8IPA6NC78 632 aa16.03■□□□□ 0.16
RPUSD1-204ENST00000563560 GOLGA8JA6NMD2 632 aa16.03■□□□□ 0.16
RPUSD1-204ENST00000563560 IL18RAPO95256 599 aa16.03■□□□□ 0.16
RPUSD1-204ENST00000563560 SEC24AO95486 1093 aa16.03■□□□□ 0.16
RPUSD1-204ENST00000563560 LDHAP00338 332 aaKnown RBP16.03■□□□□ 0.16
RPUSD1-204ENST00000563560 HNRNPA1P09651 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms