RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 C17orf75Q9HAS0 396 aa20.44■□□□□ 0.86
NME3-204ENST00000563498 NCOR2Q9Y618 2525 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 ABLIM1O14639 778 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 CCR2P41597 374 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 LMNB2Q03252 620 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 CTXN3Q4LDR2 81 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 IQCEQ6IPM2 695 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 ZNF280DQ6N043 979 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 TSSK4Q6SA08 328 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 MPZL3Q6UWV2 235 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 MAP4K3Q8IVH8 894 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 APPL2Q8NEU8 664 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 SNX29Q8TEQ0 813 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 SMARCD2Q92925 531 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 TCHPQ9BT92 498 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 CHRDQ9H2X0 955 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 KMT5AQ9NQR1 393 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 AFF4Q9UHB7 1163 aaKnown RBP20.43■□□□□ 0.86
NME3-204ENST00000563498 NOL7Q9UMY1 257 aaKnown RBP20.43■□□□□ 0.86
NME3-204ENST00000563498 DNM3Q9UQ16 869 aa20.43■□□□□ 0.86
NME3-204ENST00000563498 COL4A2P08572 1712 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 PRR5-ARHGAP8B1AHC4 643 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 HIP1RO75146 1068 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 TDGF1P13385 188 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 PSMC3P17980 439 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 EPHA5P54756 1037 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 NRLP54845 237 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 ARHGAP8P85298 464 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 GRM2Q14416 872 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 PPP2R5DQ14738 602 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 DEPDC1BQ8WUY9 529 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 C18orf25Q96B23 403 aaPredicted RBP20.42■□□□□ 0.86
NME3-204ENST00000563498 ZNF512Q96ME7 567 aaPredicted RBP20.42■□□□□ 0.86
NME3-204ENST00000563498 NTPCRQ9BSD7 190 aaKnown RBP20.42■□□□□ 0.86
NME3-204ENST00000563498 TRPV4Q9HBA0 871 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 LIMCH1Q9UPQ0 1083 aa20.42■□□□□ 0.86
NME3-204ENST00000563498 E9PMD0 336 aa20.41■□□□□ 0.86
NME3-204ENST00000563498 MLLT6P55198 1093 aaPredicted RBP20.41■□□□□ 0.86
NME3-204ENST00000563498 HMGN5P82970 282 aaKnown RBP20.41■□□□□ 0.86
NME3-204ENST00000563498 MAPK7Q13164 816 aa20.41■□□□□ 0.86
NME3-204ENST00000563498 GNL2Q13823 731 aaKnown RBP20.41■□□□□ 0.86
NME3-204ENST00000563498 DDX12PQ92771 950 aa20.41■□□□□ 0.86
NME3-204ENST00000563498 TIPINQ9BVW5 301 aa20.41■□□□□ 0.86
NME3-204ENST00000563498 ZNF334Q9HCZ1 680 aaPredicted RBP20.41■□□□□ 0.86
NME3-204ENST00000563498 CEP72Q9P209 647 aa20.41■□□□□ 0.86
NME3-204ENST00000563498 KCNG1Q9UIX4 513 aa20.41■□□□□ 0.86
NME3-204ENST00000563498 NDRG2Q9UN36 371 aaKnown RBP20.41■□□□□ 0.86
NME3-204ENST00000563498 CITO14578 2027 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 MEFVO15553 781 aaPredicted RBP20.4■□□□□ 0.86
NME3-204ENST00000563498 TOM1L1O75674 476 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 MCM4P33991 863 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 TWF1Q12792 350 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 KRT79Q5XKE5 535 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 RINT1Q6NUQ1 792 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 VITQ6UXI7 678 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 C1orf186Q6ZWK4 172 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 CCDC83Q8IWF9 413 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 FAM3CQ92520 227 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 E2F7Q96AV8 911 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 ZSWIM3Q96MP5 696 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 TBC1D32Q96NH3 1257 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 RUSC1Q9BVN2 902 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 OXCT2Q9BYC2 517 aaPredicted RBP20.4■□□□□ 0.86
NME3-204ENST00000563498 GPR88Q9GZN0 384 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 PCDHB8Q9UN66 801 aa20.4■□□□□ 0.86
NME3-204ENST00000563498 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.4■□□□□ 0.86
NME3-204ENST00000563498 LAD1O00515 517 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 NRG2O14511 850 aaPredicted RBP20.39■□□□□ 0.85
NME3-204ENST00000563498 MOSPD3O75425 235 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 TGM1P22735 817 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.85
NME3-204ENST00000563498 GDI1P31150 447 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 CCR3P51677 355 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 PTGDRQ13258 359 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 NBR1Q14596 966 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 NOLC1Q14978 699 aaKnown RBP eCLIP20.39■□□□□ 0.85
NME3-204ENST00000563498 SLC10A6Q3KNW5 377 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 HS6ST3Q8IZP7 471 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 BEST2Q8NFU1 509 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 SPIRE2Q8WWL2 714 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 MSANTD3Q96H12 275 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 ASAH2Q9NR71 780 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 GMEB2Q9UKD1 530 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 PIAS3Q9Y6X2 628 aa20.39■□□□□ 0.85
NME3-204ENST00000563498 M0QZQ0 153 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 SLC16A4O15374 487 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 OAZ2O95190 189 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 CPB1P15086 417 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 GUCY2CP25092 1073 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 MARCKSP29966 332 aaPredicted RBP20.38■□□□□ 0.85
NME3-204ENST00000563498 PRPHP41219 470 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 ATXN1P54253 815 aaKnown RBP20.38■□□□□ 0.85
NME3-204ENST00000563498 STRN3Q13033 797 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 C1orf228Q6PIY5 440 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 ZPBP2Q6X784 338 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 MFSD6LQ8IWD5 586 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 CELF5Q8N6W0 485 aaKnown RBP20.38■□□□□ 0.85
NME3-204ENST00000563498 ZSCAN18Q8TBC5 510 aaPredicted RBP20.38■□□□□ 0.85
NME3-204ENST00000563498 LMAN1LQ9HAT1 526 aa20.38■□□□□ 0.85
NME3-204ENST00000563498 PLEKHA5Q9HAU0 1116 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms