RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 FAM173BQ6P4H8 233 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 SLC39A4Q6P5W5 647 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 PDXDC1Q6P996 788 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 RNF19BQ6ZMZ0 732 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 HAUS6Q7Z4H7 955 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 GPBP1Q86WP2 473 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 PJA1Q8NG27 643 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 DDX12PQ92771 950 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 SUSD3Q96L08 255 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 PGLYRP2Q96PD5 576 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 TMEM209Q96SK2 561 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 REEP2Q9BRK0 252 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 C17orf75Q9HAS0 396 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 SLC38A7Q9NVC3 462 aa7.54□□□□□ -1.2
CDH11-208ENST00000563492 VWA8A3KMH1 1905 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 TDRD15B5MCY1 1934 aaKnown RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 KANSL1LA0AUZ9 987 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 FAM170BA6NMN3 283 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 SYN3O14994 580 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 SOAT2O75908 522 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 LRG1P02750 347 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 POU2F2P09086 479 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 CLTAP09496 248 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 MYL4P12829 197 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 ATF2P15336 505 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 PTPN2P17706 415 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 PLCG1P19174 1290 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 NMT1P30419 496 aaKnown RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 ELF1P32519 619 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 RPL9P32969 192 aaKnown RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 MCM4P33991 863 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 VIPR2P41587 438 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 MATR3P43243 847 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDH11-208ENST00000563492 SMTNP53814 917 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 TWF1Q12792 350 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 FZD5Q13467 585 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 UBXN2BQ14CS0 331 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 MLF2Q15773 248 aaPredicted RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 LARP1BQ659C4 914 aaKnown RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 TSSK4Q6SA08 328 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 APBB1IPQ7Z5R6 666 aaPredicted RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 C1orf210Q8IVY1 113 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 TCEAL8Q8IYN2 117 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 DCLK2Q8N568 766 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 MYCT1Q8N699 235 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 TTC9BQ8N6N2 239 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 KCNG4Q8TDN1 519 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 RSPRY1Q96DX4 576 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 FAM212AQ96EL1 285 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 KIF12Q96FN5 646 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 CDK5RAP3Q96JB5 506 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 FAM84AQ96KN4 292 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 FIZ1Q96SL8 496 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 DDX23Q9BUQ8 820 aaKnown RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 ZHX3Q9H4I2 956 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 HEBP1Q9NRV9 189 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 KCNH3Q9ULD8 1083 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 TBX20Q9UMR3 447 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 SLC27A5Q9Y2P5 690 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 INSL5Q9Y5Q6 135 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 STK24Q9Y6E0 443 aa7.53□□□□□ -1.2
CDH11-208ENST00000563492 ZFP37Q9Y6Q3 630 aaPredicted RBP7.53□□□□□ -1.2
CDH11-208ENST00000563492 H7C4K7 107 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 NFICP08651 508 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 CPB1P15086 417 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 MARCKSP29966 332 aaPredicted RBP7.52□□□□□ -1.21
CDH11-208ENST00000563492 HOXC13P31276 330 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 UBA7P41226 1012 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 ACOT2P49753 483 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 LIG4P49917 911 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 WNT7BP56706 349 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 DUSP4Q13115 394 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 SF3A1Q15459 793 aaKnown RBP7.52□□□□□ -1.21
CDH11-208ENST00000563492 TEAD2Q15562 447 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 STXBP5Q5T5C0 1151 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 ARL6IP4Q66PJ3 421 aaKnown RBP7.52□□□□□ -1.21
CDH11-208ENST00000563492 JADE1Q6IE81 842 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 VITQ6UXI7 678 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 TPRG1Q6ZUI0 275 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 MTSS1LQ765P7 747 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 ATAD1Q8NBU5 361 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 ZSWIM2Q8NEG5 633 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 BICD1Q96G01 975 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 EPSTI1Q96J88 318 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 LRRC3BQ96PB8 259 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 TIPINQ9BVW5 301 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 LRRC3Q9BY71 257 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 DNAJC25Q9H1X3 360 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 LTB4R2Q9NPC1 389 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 SPATA6Q9NWH7 488 aaPredicted RBP7.52□□□□□ -1.21
CDH11-208ENST00000563492 AFF4Q9UHB7 1163 aaKnown RBP7.52□□□□□ -1.21
CDH11-208ENST00000563492 PCDHB8Q9UN66 801 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 CLIC4Q9Y696 253 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 NOTCH4Q99466 2003 aa7.52□□□□□ -1.21
CDH11-208ENST00000563492 CACNA1IQ9P0X4 2223 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms