RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 HSP90AA2PQ14568 343 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 SKIV2LQ15477 1246 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CTC1Q2NKJ3 1217 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 TCEAL5Q5H9L2 206 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ADGRD2Q7Z7M1 963 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 VPS52Q8N1B4 723 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 MRPL43Q8N983 215 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 C3orf58Q8NDZ4 430 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 UROC1Q96N76 676 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 GSDMAQ96QA5 445 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 TCF25Q9BQ70 676 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 COLEC11Q9BWP8 271 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 GPR62Q9BZJ7 368 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 RPF1Q9H9Y2 349 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 GOLGA2P5Q9HBQ8 144 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CHST7Q9NS84 486 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 CGNQ9P2M7 1197 aaKnown RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 ADAM28Q9UKQ2 775 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 PCDHGC5Q9Y5F6 944 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 PCDHA5Q9Y5H7 936 aa6.73□□□□□ -1.33
CNOT1-204ENST00000563130 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-204ENST00000563130 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-204ENST00000563130 C2orf71A6NGG8 1288 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 HIDE1A8MVS5 230 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 EXTL3O43909 919 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 KINO60870 393 aaKnown RBP6.72□□□□□ -1.33
CNOT1-204ENST00000563130 KIF4AO95239 1232 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 LRPAP1P30533 357 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 RPL9P32969 192 aaKnown RBP6.72□□□□□ -1.33
CNOT1-204ENST00000563130 CLCNKBP51801 687 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 WNT7BP56706 349 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 HYAL1Q12794 435 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 KCNC3Q14003 757 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-204ENST00000563130 COBLL1Q53SF7 1204 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 SPATA1Q5VX52 437 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 ARMCX5Q6P1M9 558 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 FUT10Q6P4F1 479 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 DCLRE1AQ6PJP8 1040 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 BRSK2Q8IWQ3 736 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 NELFCDQ8IXH7 590 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 GPR65Q8IYL9 337 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 GPD1LQ8N335 351 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 RABGGTAQ92696 567 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 C18orf25Q96B23 403 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-204ENST00000563130 SAAL1Q96ER3 474 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 HSPBP1Q9NZL4 362 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 UBQLN1Q9UMX0 589 aaKnown RBP6.72□□□□□ -1.33
CNOT1-204ENST00000563130 TRAF3IP3Q9Y228 551 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 DERAQ9Y315 318 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 C2CD2Q9Y426 696 aa6.72□□□□□ -1.33
CNOT1-204ENST00000563130 PDXKO00764 312 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 B3GAT3O94766 335 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 SPAG1Q07617 926 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 PTPN14Q15678 1187 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 TMCO4Q5TGY1 634 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 KIAA0319Q5VV43 1072 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 JADE1Q6IE81 842 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 HS2ST1Q7LGA3 356 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 TAS1R1Q7RTX1 841 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 TMC7Q7Z402 723 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 NT5DC4Q86YG4 428 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 SLC9A9Q8IVB4 645 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 MICALL1Q8N3F8 863 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 GUF1Q8N442 669 aaKnown RBP6.71□□□□□ -1.33
CNOT1-204ENST00000563130 MICAL1Q8TDZ2 1067 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 PPM1EQ8WY54 764 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 ERCC4Q92889 916 aaPredicted RBP6.71□□□□□ -1.33
CNOT1-204ENST00000563130 CCDC47Q96A33 483 aaKnown RBP6.71□□□□□ -1.33
CNOT1-204ENST00000563130 FAM213AQ9BRX8 229 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 HERC2P3Q9BVR0 1158 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 PCIF1Q9H4Z3 704 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 DMAC2Q9NW81 257 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 TUBGCP4Q9UGJ1 667 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 LIMD1Q9UGP4 676 aa6.71□□□□□ -1.33
CNOT1-204ENST00000563130 PDCD11Q14690 1871 aaKnown RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 SF3B1O75533 1304 aaKnown RBP eCLIP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 GOLGA8IPA6NC78 632 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 GOLGA8JA6NMD2 632 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 PODXLO00592 558 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 NCK2O43639 380 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 TADA2AO75478 443 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 IL18RAPO95256 599 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 NFICP08651 508 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 GTF2F1P35269 517 aaKnown RBP eCLIP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 LTBRP36941 435 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 DSG1Q02413 1049 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 ADAM15Q13444 863 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 MYBPC2Q14324 1141 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 SMC1AQ14683 1233 aaKnown RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 NFIL3Q16649 462 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 DUSP6Q16828 381 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 ZCWPW2Q504Y3 356 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 ZNF658Q5TYW1 1059 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-204ENST00000563130 PLPP4Q5VZY2 271 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 TMEM184AQ6ZMB5 413 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 CBWD2Q8IUF1 395 aa6.71□□□□□ -1.34
CNOT1-204ENST00000563130 EFCAB13Q8IY85 973 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms