RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 PPP1R3GB7ZBB8 358 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 ZNF197O14709 1029 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 N4BP3O15049 544 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 B3GAT3O94766 335 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 SEC24AO95486 1093 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 EDN1P05305 212 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 PROS1P07225 676 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 TKTP29401 623 aaKnown RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 FNTBP49356 437 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 SRSF5Q13243 272 aaKnown RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 C1orf228Q6PIY5 440 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 PRR23BQ6ZRT6 265 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 WDR5BQ86VZ2 330 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 MFSD6LQ8IWD5 586 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 TPH2Q8IWU9 490 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 SLFN12Q8IYM2 578 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 FAM160A2Q8N612 972 aaPredicted RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 ZNF274Q96GC6 653 aaPredicted RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 LOXL4Q96JB6 756 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 UROC1Q96N76 676 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 NAP1L4Q99733 375 aaKnown RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 POLR3FQ9H1D9 316 aaPredicted RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 SLKQ9H2G2 1235 aaPredicted RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 C2orf42Q9NWW7 574 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 RALYQ9UKM9 306 aaKnown RBP9.18□□□□□ -0.94
CKLF-208ENST00000563092 MAFFQ9ULX9 164 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 WASF3Q9UPY6 502 aa9.18□□□□□ -0.94
CKLF-208ENST00000563092 ZFYVE26Q68DK2 2539 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 ACKR2O00590 384 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 CCNT1O60563 726 aaKnown RBP9.17□□□□□ -0.94
CKLF-208ENST00000563092 ZNF806P0C7X5 589 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 GDI1P31150 447 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 RAP1GAPP47736 663 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 CLCNKBP51801 687 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 FCHO2Q0JRZ9 810 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 PLA2G2CQ5R387 149 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 EEF1DP3Q658K8 133 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 NCAPH2Q6IBW4 605 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 ALKAL1Q6UXT8 129 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 NOSTRINQ8IVI9 506 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 KDF1Q8NAX2 398 aaPredicted RBP9.17□□□□□ -0.94
CKLF-208ENST00000563092 LEMD2Q8NC56 503 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 TNFRSF25Q93038 417 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 RSPRY1Q96DX4 576 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 LRRC3Q9BY71 257 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 GPRC5CQ9NQ84 441 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
CKLF-208ENST00000563092 RXFP3Q9NSD7 469 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 CEP72Q9P209 647 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 KCNJ14Q9UNX9 436 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 INSL5Q9Y5Q6 135 aa9.17□□□□□ -0.94
CKLF-208ENST00000563092 TICRRQ7Z2Z1 1910 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 CCDC163A0A0D9SF12 145 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 CCDC194A0A1B0GVG4 234 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 MYBPHLA2RUH7 354 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 LRRIQ4A6NIV6 560 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 I3L4J1 428 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 SYN3O14994 580 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 CHADO15335 359 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 TRAPPC3O43617 180 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 EPN2O95208 641 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 LRG1P02750 347 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 SPATA31C1P0DKV0 1188 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 CCNE1P24864 410 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 VIPR2P41587 438 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 BRCC3P46736 316 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 SOX4Q06945 474 aaPredicted RBP9.16□□□□□ -0.94
CKLF-208ENST00000563092 PRPF4BQ13523 1007 aaKnown RBP9.16□□□□□ -0.94
CKLF-208ENST00000563092 CCINQ13939 588 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 LRRC32Q14392 662 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 DGKKQ5KSL6 1271 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 TPGS2Q68CL5 300 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 Q6ZS52 159 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 PDZD4Q76G19 769 aaPredicted RBP9.16□□□□□ -0.94
CKLF-208ENST00000563092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.16□□□□□ -0.94
CKLF-208ENST00000563092 SYNPOQ8N3V7 929 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 MCPH1Q8NEM0 835 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 BEST2Q8NFU1 509 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 PIGOQ8TEQ8 1089 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 BSNDQ8WZ55 320 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 E2F7Q96AV8 911 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 CORO1BQ9BR76 489 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 LSM14BQ9BX40 385 aaKnown RBP9.16□□□□□ -0.94
CKLF-208ENST00000563092 C2orf40Q9H1Z8 148 aa9.16□□□□□ -0.94
CKLF-208ENST00000563092 C8orf33Q9H7E9 229 aaPredicted RBP9.16□□□□□ -0.94
CKLF-208ENST00000563092 ANKRD11Q6UB99 2663 aaPredicted RBP9.15□□□□□ -0.94
CKLF-208ENST00000563092 STK36Q9NRP7 1315 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 SMIM28A0A1B0GU29 152 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 HEPACAM2A8MVW5 462 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 PRRG1O14668 218 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 ZNF263O14978 683 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 CDC45O75419 566 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 BAG4O95429 457 aaKnown RBP9.15□□□□□ -0.94
CKLF-208ENST00000563092 PSMA5P28066 241 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 HOXC13P31276 330 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 COL9A2Q14055 689 aaPredicted RBP9.15□□□□□ -0.94
CKLF-208ENST00000563092 SF3A2Q15428 464 aaKnown RBP9.15□□□□□ -0.94
CKLF-208ENST00000563092 MAPK6Q16659 721 aa9.15□□□□□ -0.94
CKLF-208ENST00000563092 DCAF4L1Q3SXM0 396 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms