RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 GOLGA6L4A6NEF3 574 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 GOLGA8JA6NMD2 632 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 I3L4J1 428 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 PIRO00625 290 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 SYN3O14994 580 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 TBC1D4O60343 1298 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 TKTP29401 623 aaKnown RBP20.26■□□□□ 0.83
CDH11-206ENST00000562998 PDXDC1Q6P996 788 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 CEP57Q86XR8 500 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 NELFCDQ8IXH7 590 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 BEST2Q8NFU1 509 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 FAM212AQ96EL1 285 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 TIGD1Q96MW7 591 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 NECAB3Q96P71 396 aaPredicted RBP20.26■□□□□ 0.83
CDH11-206ENST00000562998 UHRF1Q96T88 793 aaPredicted RBP20.26■□□□□ 0.83
CDH11-206ENST00000562998 DZANK1Q9NVP4 752 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 HSPBP1Q9NZL4 362 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 MTRRQ9UBK8 725 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 FAM50BQ9Y247 325 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 USP15Q9Y4E8 981 aaPredicted RBP20.26■□□□□ 0.83
CDH11-206ENST00000562998 BACE2Q9Y5Z0 518 aa20.26■□□□□ 0.83
CDH11-206ENST00000562998 MTCL1Q9Y4B5 1905 aaKnown RBP20.25■□□□□ 0.83
CDH11-206ENST00000562998 M0QZQ0 153 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 PPEF2O14830 753 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 RPL17P18621 184 aaKnown RBP20.25■□□□□ 0.83
CDH11-206ENST00000562998 PSMD5Q16401 504 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 C9orf57Q5W0N0 161 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 ELOA2Q8IYF1 753 aaPredicted RBP20.25■□□□□ 0.83
CDH11-206ENST00000562998 CXorf38Q8TB03 319 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 SPATA20Q8TB22 786 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 HDAC7Q8WUI4 952 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 KCTD10Q9H3F6 313 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 RBAKQ9NYW8 714 aaPredicted RBP20.25■□□□□ 0.83
CDH11-206ENST00000562998 PRKAG3Q9UGI9 489 aa20.25■□□□□ 0.83
CDH11-206ENST00000562998 DLL1O00548 723 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 ADAM12O43184 909 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 TGM5O43548 720 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 PAX3P23760 479 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 ITIH3Q06033 890 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 RSPO2Q6UXX9 243 aaPredicted RBP20.24■□□□□ 0.83
CDH11-206ENST00000562998 ANKS3Q6ZW76 656 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 CBWD2Q8IUF1 395 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 ADAM7Q9H2U9 754 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 KIAA1586Q9HCI6 787 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 NUB1Q9Y5A7 615 aa20.24■□□□□ 0.83
CDH11-206ENST00000562998 C19orf67A6NJJ6 358 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
CDH11-206ENST00000562998 GLUD1P00367 558 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 SCN1AP35498 2009 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 LILRA4P59901 499 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 ZP2Q05996 745 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 RAB33AQ14088 237 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 VARS2Q5ST30 1063 aaKnown RBP20.23■□□□□ 0.83
CDH11-206ENST00000562998 SLC8B1Q6J4K2 584 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 HS2ST1Q7LGA3 356 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 FEZF2Q8TBJ5 459 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 CD320Q9NPF0 282 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 DMAC2Q9NW81 257 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 DPP3Q9NY33 737 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 PCDHB8Q9UN66 801 aa20.23■□□□□ 0.83
CDH11-206ENST00000562998 ZNF233A6NK53 670 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 CLIC2O15247 247 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 SPTLC1O15269 473 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 MCM4P33991 863 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 ADHFE1Q8IWW8 467 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 C12orf76Q8N812 135 aaPredicted RBP20.22■□□□□ 0.83
CDH11-206ENST00000562998 XXYLT1Q8NBI6 393 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 CMASQ8NFW8 434 aaPredicted RBP20.22■□□□□ 0.83
CDH11-206ENST00000562998 GOLGA5Q8TBA6 731 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 BORCS6Q96GS4 357 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 CCDC34Q96HJ3 373 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 RHOBTB2Q9BYZ6 727 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
CDH11-206ENST00000562998 PLEKHA4Q9H4M7 779 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 SFXN1Q9H9B4 322 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 MAN1C1Q9NR34 630 aa20.22■□□□□ 0.83
CDH11-206ENST00000562998 PDXKO00764 312 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 PNOCQ13519 176 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 CBX2Q14781 532 aaPredicted RBP20.21■□□□□ 0.83
CDH11-206ENST00000562998 SNRNP35Q16560 246 aaKnown RBP20.21■□□□□ 0.83
CDH11-206ENST00000562998 SCARA3Q6AZY7 606 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 CLEC17AQ6ZS10 378 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 GLYCTKQ8IVS8 523 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 C1orf127Q8N9H9 656 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 APOL5Q9BWW9 433 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 DPP7Q9UHL4 492 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 FBXW11Q9UKB1 542 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 PTPRJQ12913 1337 aa20.21■□□□□ 0.83
CDH11-206ENST00000562998 OAZ2O95190 189 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 OR1D2P34982 312 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 SURF1Q15526 300 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 RARS2Q5T160 578 aaKnown RBP20.2■□□□□ 0.82
CDH11-206ENST00000562998 C15orf39Q6ZRI6 1047 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 GPR149Q86SP6 731 aa20.2■□□□□ 0.82
CDH11-206ENST00000562998 GUF1Q8N442 669 aaKnown RBP20.2■□□□□ 0.82
CDH11-206ENST00000562998 APPL2Q8NEU8 664 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms