RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 RRP9O43818 475 aaKnown RBP5.87□□□□□ -1.47
CHD9-206ENST00000562791 CDKN1CP49918 316 aaPredicted RBP5.87□□□□□ -1.47
CHD9-206ENST00000562791 VAV2P52735 878 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 CTXN1P60606 82 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 Q6ZNX1 250 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 FAM43AQ8N2R8 423 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 Q8NA96 180 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 FAM98AQ8NCA5 519 aaKnown RBP5.87□□□□□ -1.47
CHD9-206ENST00000562791 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.87□□□□□ -1.47
CHD9-206ENST00000562791 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 SSH1Q8WYL5 1049 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 VOPP1Q96AW1 172 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 TLR10Q9BXR5 811 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 SPC25Q9HBM1 224 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 PTGFRNQ9P2B2 879 aa5.87□□□□□ -1.47
CHD9-206ENST00000562791 COL11A2P13942 1736 aaPredicted RBP5.86□□□□□ -1.47
CHD9-206ENST00000562791 HAUS5O94927 633 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 EDNRBP24530 442 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 MTMR1Q13613 665 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 ACAP2Q15057 778 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 C3orf36Q3SXR2 165 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.86□□□□□ -1.47
CHD9-206ENST00000562791 RD3Q7Z3Z2 195 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 IFI44Q8TCB0 444 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 PNKPQ96T60 521 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 CCDC8Q9H0W5 538 aaPredicted RBP5.86□□□□□ -1.47
CHD9-206ENST00000562791 CASS4Q9NQ75 786 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 TBCCD1Q9NVR7 557 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 MKS1Q9NXB0 559 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 LIMCH1Q9UPQ0 1083 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 IPPQ9Y573 584 aa5.86□□□□□ -1.47
CHD9-206ENST00000562791 MYO15BQ96JP2 1530 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 SPATA31A6Q5VVP1 1343 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 GRM6O15303 877 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 ERN1O75460 977 aaKnown RBP5.85□□□□□ -1.47
CHD9-206ENST00000562791 MYBL2P10244 700 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 SIM1P81133 766 aaPredicted RBP5.85□□□□□ -1.47
CHD9-206ENST00000562791 CDC42EP1Q00587 391 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 CREMQ03060 361 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 IL10RAQ13651 578 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 CCDC142Q17RM4 750 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 FLYWCH1Q4VC44 716 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 ZNF362Q5T0B9 420 aaPredicted RBP5.85□□□□□ -1.47
CHD9-206ENST00000562791 SYDE2Q5VT97 1194 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 FBXO42Q6P3S6 717 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 FOXR2Q6PJQ5 311 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 SSH3Q8TE77 659 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 FAXDC2Q96IV6 333 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 TDP1Q9NUW8 608 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 FOXJ2Q9P0K8 574 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 SERPINB13Q9UIV8 391 aa5.85□□□□□ -1.47
CHD9-206ENST00000562791 HTRA2O43464 458 aaPredicted RBP5.84□□□□□ -1.47
CHD9-206ENST00000562791 XPOTO43592 962 aaKnown RBP5.84□□□□□ -1.47
CHD9-206ENST00000562791 IL12RB1P42701 662 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 ZNF280AP59817 542 aaPredicted RBP5.84□□□□□ -1.47
CHD9-206ENST00000562791 SETQ01105 290 aaPredicted RBP5.84□□□□□ -1.47
CHD9-206ENST00000562791 ZNF169Q14929 603 aaPredicted RBP5.84□□□□□ -1.47
CHD9-206ENST00000562791 PCBP2Q15366 365 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHD9-206ENST00000562791 RSPH3Q86UC2 560 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 KAT5Q92993 513 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 PTCD3Q96EY7 689 aaKnown RBP5.84□□□□□ -1.47
CHD9-206ENST00000562791 TEKT5Q96M29 485 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 AIFM2Q9BRQ8 373 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 TMX1Q9H3N1 280 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 KCTD5Q9NXV2 234 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 INSL6Q9Y581 213 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 COX11Q9Y6N1 276 aa5.84□□□□□ -1.47
CHD9-206ENST00000562791 CENPJQ9HC77 1338 aaPredicted RBP5.83□□□□□ -1.48
CHD9-206ENST00000562791 MYADML2A6NDP7 307 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 MASP2O00187 686 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 GABRDO14764 452 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 KATNA1O75449 491 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 AGFG2O95081 481 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 MCCP23508 829 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 C21orf58P58505 322 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 CALD1Q05682 793 aaKnown RBP5.83□□□□□ -1.48
CHD9-206ENST00000562791 ERCC6LQ2NKX8 1250 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 LNX2Q8N448 690 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 BOLLQ8N9W6 283 aaKnown RBP5.83□□□□□ -1.48
CHD9-206ENST00000562791 SLC9A6Q92581 669 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 SECISBP2LQ93073 1101 aaKnown RBP5.83□□□□□ -1.48
CHD9-206ENST00000562791 HDAC10Q969S8 669 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 MTMR8Q96EF0 704 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 MRGPRX4Q96LA9 322 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 KRTAP9-8Q9BYQ0 159 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 SAP30BPQ9UHR5 308 aaKnown RBP5.83□□□□□ -1.48
CHD9-206ENST00000562791 TLK1Q9UKI8 766 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 SLC45A2Q9UMX9 530 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 CDYLQ9Y232 598 aa5.83□□□□□ -1.48
CHD9-206ENST00000562791 KAT6AQ92794 2004 aa5.82□□□□□ -1.48
CHD9-206ENST00000562791 SBNO2Q9Y2G9 1366 aa5.82□□□□□ -1.48
CHD9-206ENST00000562791 CCDC154A6NI56 674 aa5.82□□□□□ -1.48
CHD9-206ENST00000562791 CD1AP06126 327 aa5.82□□□□□ -1.48
CHD9-206ENST00000562791 PTMAP06454 111 aaKnown RBP5.82□□□□□ -1.48
CHD9-206ENST00000562791 ZNF37AP17032 561 aaPredicted RBP5.82□□□□□ -1.48
CHD9-206ENST00000562791 GUCY2FP51841 1108 aa5.82□□□□□ -1.48
CHD9-206ENST00000562791 KIF23Q02241 960 aaPredicted RBP5.82□□□□□ -1.48
CHD9-206ENST00000562791 FAM50AQ14320 339 aaKnown RBP5.82□□□□□ -1.48
CHD9-206ENST00000562791 ATP2B3Q16720 1220 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms