RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 AFAP1L1Q8TED9 768 aa8□□□□□ -1.13
TCF4-216ENST00000562680 TEPSINQ96N21 525 aa8□□□□□ -1.13
TCF4-216ENST00000562680 STARD7Q9NQZ5 370 aa8□□□□□ -1.13
TCF4-216ENST00000562680 FBXL5Q9UKA1 691 aa8□□□□□ -1.13
TCF4-216ENST00000562680 DSEQ9UL01 958 aa8□□□□□ -1.13
TCF4-216ENST00000562680 A0A087WZ62 844 aa8□□□□□ -1.13
TCF4-216ENST00000562680 GOLGA8KD6RF30 607 aa8□□□□□ -1.13
TCF4-216ENST00000562680 LSM8O95777 96 aaKnown RBP8□□□□□ -1.13
TCF4-216ENST00000562680 KCNA3P22001 575 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ADCYAP1R1P41586 468 aa8□□□□□ -1.13
TCF4-216ENST00000562680 MAP3K10Q02779 954 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ENPEPQ07075 957 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ELAVL2Q12926 359 aaKnown RBP8□□□□□ -1.13
TCF4-216ENST00000562680 IL17AQ16552 155 aa8□□□□□ -1.13
TCF4-216ENST00000562680 LMBRD2Q68DH5 695 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 ABHD15Q6UXT9 468 aa8□□□□□ -1.13
TCF4-216ENST00000562680 PALM2Q8IXS6 379 aa8□□□□□ -1.13
TCF4-216ENST00000562680 SLC35C1Q96A29 364 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ZBED3Q96IU2 234 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 CHP1Q99653 195 aa8□□□□□ -1.13
TCF4-216ENST00000562680 BUD13Q9BRD0 619 aaKnown RBP eCLIP8□□□□□ -1.13
TCF4-216ENST00000562680 FDXACB1Q9BRP7 624 aaPredicted RBP8□□□□□ -1.13
TCF4-216ENST00000562680 CPSF3Q9UKF6 684 aaKnown RBP8□□□□□ -1.13
TCF4-216ENST00000562680 FZD1Q9UP38 647 aa8□□□□□ -1.13
TCF4-216ENST00000562680 TRPV2Q9Y5S1 764 aa8□□□□□ -1.13
TCF4-216ENST00000562680 ASTN2O75129 1339 aaPredicted RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 DDX60Q8IY21 1712 aaKnown RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 THPOP40225 353 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 ARHGAP25P42331 645 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 CDR2Q01850 454 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 IFRD2Q12894 506 aaPredicted RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 ITGB3BPQ13352 177 aaPredicted RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 C4orf50Q6ZRC1 276 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 CDKL2Q92772 493 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 ATP2A3Q93084 1043 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 OSBPL9Q96SU4 736 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 DPP3Q9NY33 737 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 M0R2N6 131 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 CTNNA1P35221 906 aaKnown RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 CASP4P49662 377 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 KAZNQ674X7 775 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 LMNTD2Q8IXW0 634 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 TTC16Q8NEE8 873 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 INTS13Q9NVM9 706 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 KANSL3Q9P2N6 904 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 TNFSF13BQ9Y275 285 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 PPFIA2O75334 1257 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 FGGP02679 453 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 VDRP11473 427 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 PAX7P23759 505 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 DR1Q01658 176 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 MTA1Q13330 715 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 SHROOM1Q2M3G4 852 aaPredicted RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 CEP85LQ5SZL2 805 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 FAM102AQ5T9C2 384 aaPredicted RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 ELMOD1Q8N336 334 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 CABS1Q96KC9 395 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 COLEC11Q9BWP8 271 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 VPS37BQ9H9H4 285 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 AIPL1Q9NZN9 384 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 SAMD15Q9P1V8 674 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 IPO11Q9UI26 975 aaKnown RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 SGK1O00141 431 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 TBC1D8O95759 1140 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 ZBED1O96006 694 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 KRT3P12035 628 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 KRT10P13645 584 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 NCKAP1LP55160 1127 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 RAD9BQ6WBX8 426 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 SV2AQ7L0J3 742 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 PCGF5Q86SE9 256 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 KSR1Q8IVT5 923 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 TRIM42Q8IWZ5 723 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 NIFKQ9BYG3 293 aaKnown RBP7.99□□□□□ -1.13
TCF4-216ENST00000562680 SNX12Q9UMY4 172 aa7.99□□□□□ -1.13
TCF4-216ENST00000562680 RPTORQ8N122 1335 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 A0A0A6YYK5 440 aaPredicted RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 FKTNO75072 461 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 ODC1P11926 461 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 KCNA2P16389 499 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 EIF3BP55884 814 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 MRPS9P82933 396 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 DYNC1I2Q13409 638 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 EFHC2Q5JST6 749 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 LRRC31Q6UY01 552 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 SYDE1Q6ZW31 735 aaPredicted RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 PASD1Q8IV76 773 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 DPH5Q9H2P9 285 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 H3BRJ5 948 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 RGS16O15492 202 aaPredicted RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 SMIM24O75264 130 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 RALAP11233 206 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 MARSP56192 900 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 DHX34Q14147 1143 aaKnown RBP7.98□□□□□ -1.13
TCF4-216ENST00000562680 SNX17Q15036 470 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 CASC4Q6P4E1 433 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 CCDC63Q8NA47 563 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 TMEM161BQ8NDZ6 487 aa7.98□□□□□ -1.13
TCF4-216ENST00000562680 PARD3BQ8TEW8 1205 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms