RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ITGB2P05107 769 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 PLA2G4BP0C869 781 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 CYP11B2P19099 503 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 SFPQP23246 707 aaKnown RBP eCLIP6.41□□□□□ -1.38
CDH13-206ENST00000562601 MAPK1P28482 360 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 UBA7P41226 1012 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 CDC42EP1Q00587 391 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 TFDP1Q14186 410 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 BTG3Q14201 252 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 STK38Q15208 465 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 ODR4Q5SWX8 454 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 ARL6IP4Q66PJ3 421 aaKnown RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 TWF2Q6IBS0 349 aaKnown RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 RINT1Q6NUQ1 792 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 SLC24A5Q71RS6 500 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 ZNF410Q86VK4 478 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 CDR2LQ86X02 465 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 NPAS4Q8IUM7 802 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 FIBCD1Q8N539 461 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 TMEM102Q8N9M5 508 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 RASSF8Q8NHQ8 419 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 ALKBH8Q96BT7 664 aaKnown RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 ZNF689Q96CS4 500 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 TGS1Q96RS0 853 aaKnown RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 KIFC3Q9BVG8 833 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 RUSC1Q9BVN2 902 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 INO80BQ9C086 356 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 DNAJC25Q9H1X3 360 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 ZSCAN16Q9H4T2 348 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 DZANK1Q9NVP4 752 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 FBXO2Q9UK22 296 aaPredicted RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 MRPL42Q9Y6G3 142 aaKnown RBP6.41□□□□□ -1.38
CDH13-206ENST00000562601 PLXNA4Q9HCM2 1894 aa6.41□□□□□ -1.38
CDH13-206ENST00000562601 ATG2AQ2TAZ0 1938 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 PRRC2BQ5JSZ5 2229 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 CCDC169A6NNP5 214 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 MEIS3P2A8K0S8 358 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 GAS2O43903 313 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 TSPAN1O60635 241 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 LPXNO60711 386 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 BMP15O95972 392 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 EDN1P05305 212 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 STAG3L1P0CL83 205 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 PLCG1P19174 1290 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 MUTP22033 750 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 HOXA11P31270 313 aaPredicted RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 CTNNB1P35222 781 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 LONP1P36776 959 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 PTENP60484 403 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 ERVK-21P61565 698 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 FAM189BP81408 668 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 MBTD1Q05BQ5 628 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 MXD4Q14582 209 aaPredicted RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 SLC39A14Q15043 492 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 TMEM119Q4V9L6 283 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 EPC2Q52LR7 807 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 SPOUT1Q5T280 376 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 C1orf186Q6ZWK4 172 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 SRGAP1Q7Z6B7 1085 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 CD163Q86VB7 1156 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 ECHDC2Q86YB7 292 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 MCPH1Q8NEM0 835 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 MAFAQ8NHW3 353 aaPredicted RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 CALML4Q96GE6 196 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 ZNF396Q96N95 335 aaPredicted RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 CASD1Q96PB1 797 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 EIF2AQ9BY44 585 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 LACRTQ9GZZ8 138 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 ADAM19Q9H013 955 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 RC3H2Q9HBD1 1191 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 C1orf112Q9NSG2 853 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 RNF19AQ9NV58 838 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 STXBP5LQ9Y2K9 1186 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 ZDHHC9Q9Y397 364 aa6.4□□□□□ -1.38
CDH13-206ENST00000562601 SRPRBQ9Y5M8 271 aaKnown RBP6.4□□□□□ -1.38
CDH13-206ENST00000562601 ADGRA3Q8IWK6 1321 aa6.4□□□□□ -1.39
CDH13-206ENST00000562601 TRIP11Q15643 1979 aa6.4□□□□□ -1.39
CDH13-206ENST00000562601 MYO7AQ13402 2215 aa6.4□□□□□ -1.39
CDH13-206ENST00000562601 A0A0U1RQF3 1178 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 SPTLC2O15270 562 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 SLC16A4O15374 487 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 ERLIN2O94905 339 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 NPTXRO95502 500 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 LINC00271P0C7V0 271 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 ATF7P17544 494 aaPredicted RBP6.39□□□□□ -1.39
CDH13-206ENST00000562601 BMPR1AP36894 532 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 PBX3P40426 434 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 CHRNA4P43681 627 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 NASPP49321 788 aaPredicted RBP6.39□□□□□ -1.39
CDH13-206ENST00000562601 SLC12A3P55017 1021 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 PEX3P56589 373 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 GPM6BQ13491 265 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 BECN1Q14457 450 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 ARSHQ5FYA8 562 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 CLLU1OSQ5K130 101 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 HYIQ5T013 277 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 IGF2-ASQ6U949 168 aa6.39□□□□□ -1.39
CDH13-206ENST00000562601 LRRC55Q6ZSA7 311 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms