RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 MCM9Q9NXL9 1143 aa6.9□□□□□ -1.3
TCF4-213ENST00000562543 ZFP37Q9Y6Q3 630 aaPredicted RBP6.9□□□□□ -1.3
TCF4-213ENST00000562543 BAZ2AQ9UIF9 1905 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 CCDC163A0A0D9SF12 145 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CCDC195A0A1B0GUA6 201 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CCDC194A0A1B0GVG4 234 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 MAN2B1O00754 1011 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 INPPL1O15357 1258 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 FTH1P19P0C7X4 201 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CCDC192P0DO97 292 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CTSAP10619 480 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CHRNB1P11230 501 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 CYP7A1P22680 504 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 EIF2S3P41091 472 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 BNIP3Q12983 259 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 BMS1Q14692 1282 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 POU4F3Q15319 338 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 ZNF648Q5T619 568 aaPredicted RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 ALKBH2Q6NS38 261 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 PDXDC1Q6P996 788 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 LRRC55Q6ZSA7 311 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 MTSS1LQ765P7 747 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 TMC8Q8IU68 726 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 TMEM87AQ8NBN3 555 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 TSR2Q969E8 191 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 ZNF707Q96C28 371 aaPredicted RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 MPHOSPH6Q99547 160 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 RIOK1Q9BRS2 568 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 MAN1C1Q9NR34 630 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 C1GALT1Q9NS00 363 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 TCP11L1Q9NUJ3 509 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 AP4E1Q9UPM8 1137 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 MAN2B2Q9Y2E5 1009 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 SUPT16HQ9Y5B9 1047 aaKnown RBP6.89□□□□□ -1.31
TCF4-213ENST00000562543 PCDHB7Q9Y5E2 793 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 KAT6AQ92794 2004 aa6.89□□□□□ -1.31
TCF4-213ENST00000562543 MTCL1Q9Y4B5 1905 aaKnown RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 AKAP9Q99996 3911 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 A0A1W2PP55 124 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 PATE3B3GLJ2 98 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 NFIBO00712 420 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 MEFVO15553 781 aaPredicted RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 ASPAP45381 313 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 RHDQ02161 417 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 MAP7Q14244 749 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 VPS52Q8N1B4 723 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 PNPLA1Q8N8W4 532 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 DNERQ8NFT8 737 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 BCL7CQ8WUZ0 217 aaPredicted RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 SMG7Q92540 1137 aaKnown RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 DNASE1L2Q92874 299 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 TCF12Q99081 682 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 TRIM56Q9BRZ2 755 aaKnown RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 CLEC4MQ9H2X3 399 aaPredicted RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 ADAMTS10Q9H324 1103 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 TMX1Q9H3N1 280 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 ACSS3Q9H6R3 686 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 RAD18Q9NS91 495 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 SETD4Q9NVD3 440 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 NYAP2Q9P242 653 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 CDY2AQ9Y6F7 541 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 SQORQ9Y6N5 450 aa6.88□□□□□ -1.31
TCF4-213ENST00000562543 GOLGA4Q13439 2230 aaKnown RBP6.88□□□□□ -1.31
TCF4-213ENST00000562543 PDCD11Q14690 1871 aaKnown RBP6.87□□□□□ -1.31
TCF4-213ENST00000562543 CELSR2Q9HCU4 2923 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 PTPDC1A2A3K4 754 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 TRABD2BA6NFA1 517 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 RFPL2O75678 378 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 UQCRFS1P1P0C7P4 283 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 FGFR1P11362 822 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 GNAT1P11488 350 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 JUNBP17275 347 aaPredicted RBP6.87□□□□□ -1.31
TCF4-213ENST00000562543 CDK8P49336 464 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 STAT2P52630 851 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 IRX4P78413 519 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 HNRNPDQ14103 355 aaKnown RBP6.87□□□□□ -1.31
TCF4-213ENST00000562543 ZNF124Q15973 351 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 HSDL1Q3SXM5 330 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 SEZ6L2Q6UXD5 910 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 SEPT14Q6ZU15 432 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 TMPRSS7Q7RTY8 843 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 CCNJLQ8IV13 435 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 LRRC43Q8N309 656 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 LMBR1Q8WVP7 490 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 MED8Q96G25 268 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 LIN7BQ9HAP6 207 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 PIH1D3Q9NQM4 214 aaKnown RBP6.87□□□□□ -1.31
TCF4-213ENST00000562543 CCPG1Q9ULG6 757 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 PADI3Q9ULW8 664 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 PA2G4Q9UQ80 394 aaKnown RBP6.87□□□□□ -1.31
TCF4-213ENST00000562543 AKAP2Q9Y2D5 859 aa6.87□□□□□ -1.31
TCF4-213ENST00000562543 CRYBG3Q68DQ2 2970 aa6.86□□□□□ -1.31
TCF4-213ENST00000562543 TNRC6BQ9UPQ9 1833 aaKnown RBP6.86□□□□□ -1.31
TCF4-213ENST00000562543 H3BRB1 525 aa6.86□□□□□ -1.31
TCF4-213ENST00000562543 TLX3O43711 291 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms