RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 PLXNA3P51805 1871 aa18.08■□□□□ 0.49
CLK3-207ENST00000562389 BRWD1Q9NSI6 2320 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 PPEF2O14830 753 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 SYN3O14994 580 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 LINC01565O15544 149 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 GLP2RO95838 553 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 CNPP09543 421 aaKnown RBP18.08■□□□□ 0.48
CLK3-207ENST00000562389 PPP1R2P41236 205 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 TFAMQ00059 246 aaKnown RBP18.08■□□□□ 0.48
CLK3-207ENST00000562389 CAMK4Q16566 473 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 TMEM184AQ6ZMB5 413 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 PPFIBP1Q86W92 1011 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 CEP57Q86XR8 500 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 WDR49Q8IV35 697 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 ADSSL1Q8N142 457 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 TRIML1Q8N9V2 468 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 VN1R2Q8NFZ6 395 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 ANKRD36BP1Q96IX9 119 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 INTS13Q9NVM9 706 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 KIAA1468Q9P260 1216 aa18.08■□□□□ 0.48
CLK3-207ENST00000562389 TSC2P49815 1807 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 I3L4J1 428 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 M0QZQ0 153 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 MAPK13O15264 365 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 TBX10O75333 385 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 TMEM191BP0C7N4 346 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 SRGAP2BP0DMP2 458 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 NR2F2P24468 414 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 TKTP29401 623 aaKnown RBP18.07■□□□□ 0.48
CLK3-207ENST00000562389 LTBRP36941 435 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 STIM1Q13586 685 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 ISM2Q6H9L7 571 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 CENPPQ6IPU0 288 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 C1orf127Q8N9H9 656 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 LNX1Q8TBB1 728 aaPredicted RBP18.07■□□□□ 0.48
CLK3-207ENST00000562389 ATXN2LQ8WWM7 1075 aaKnown RBP18.07■□□□□ 0.48
CLK3-207ENST00000562389 FNBP1Q96RU3 617 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 CGRRF1Q99675 332 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 MTMR12Q9C0I1 747 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 ITGA11Q9UKX5 1188 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 FRMD4BQ9Y2L6 1034 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 HCFC2Q9Y5Z7 792 aa18.07■□□□□ 0.48
CLK3-207ENST00000562389 REV3LO60673 3130 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 PTPRJQ12913 1337 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 TEX28O15482 410 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 ADH1AP07327 375 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 BMP6P22004 513 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 RPL13P26373 211 aaKnown RBP18.06■□□□□ 0.48
CLK3-207ENST00000562389 CASP4P49662 377 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 NDUFV1P49821 464 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 LILRA4P59901 499 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 PSMD5Q16401 504 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 LMBRD2Q68DH5 695 aaPredicted RBP18.06■□□□□ 0.48
CLK3-207ENST00000562389 PRSS55Q6UWB4 352 aaPredicted RBP18.06■□□□□ 0.48
CLK3-207ENST00000562389 ANKS3Q6ZW76 656 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLK3-207ENST00000562389 CXorf38Q8TB03 319 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 SLC22A17Q8WUG5 538 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 CASP10Q92851 521 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 DHTKD1Q96HY7 919 aaPredicted RBP18.06■□□□□ 0.48
CLK3-207ENST00000562389 ZNF560Q96MR9 790 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 TSG101Q99816 390 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 GZF1Q9H116 711 aaPredicted RBP18.06■□□□□ 0.48
CLK3-207ENST00000562389 NUP62CLQ9H1M0 184 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 MTRRQ9UBK8 725 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 PCDHB8Q9UN66 801 aa18.06■□□□□ 0.48
CLK3-207ENST00000562389 MTCL1Q9Y4B5 1905 aaKnown RBP18.06■□□□□ 0.48
CLK3-207ENST00000562389 TULP1O00294 542 aaPredicted RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 BIN1O00499 593 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 PSMA7O14818 248 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 C1RP00736 705 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 TNNC2P02585 160 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 ITGB3P05106 788 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 DLATP10515 647 aaKnown RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 CD44P16070 742 aaKnown RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 TNNI1P19237 187 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 KCNA5P22460 613 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 KLRC2P26717 231 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 POLR2BP30876 1174 aaKnown RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 PNPLA4P41247 253 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 TAF6P49848 677 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 CLCN4P51793 760 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 RBM10P98175 930 aaKnown RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 TFF2Q03403 129 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 LRRC63Q05C16 580 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 DLX2Q07687 328 aaPredicted RBP18.05■□□□□ 0.48
CLK3-207ENST00000562389 ADAM9Q13443 819 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 DUOXA2Q1HG44 320 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 LEXMQ3ZCV2 418 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 CEP135Q66GS9 1140 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 LLGL2Q6P1M3 1020 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 EP400NLQ6ZTU2 488 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 APPL2Q8NEU8 664 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 OR5B17Q8NGF7 314 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 GPT2Q8TD30 523 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 PLEKHO2Q8TD55 490 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 PARD3BQ8TEW8 1205 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 CCDC127Q96BQ5 260 aa18.05■□□□□ 0.48
CLK3-207ENST00000562389 MSLNLQ96KJ4 702 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms