RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ZPBP2Q6X784 338 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 KCNG4Q8TDN1 519 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 DDX12PQ92771 950 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TCEAL4Q96EI5 215 aa18.23■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SHISA7A6NL88 538 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 FAM170BA6NMN3 283 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PLA2G4BP0C869 781 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SMTNP53814 917 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SPAG1Q07617 926 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 RABEP1Q15276 862 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TMEM119Q4V9L6 283 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ARSHQ5FYA8 562 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TPGS2Q68CL5 300 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ZNF280DQ6N043 979 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 KCTD17Q8N5Z5 321 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ELSPBP1Q96BH3 223 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 BCO2Q9BYV7 579 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 LTB4R2Q9NPC1 389 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 KCND2Q9NZV8 630 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 KIF3AQ9Y496 699 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 GVINP1Q7Z2Y8 2422 aa18.22■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 COL4A2P08572 1712 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PTPRZ1P23471 2315 aaPredicted RBP18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TTC26A0AVF1 554 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CLDN3O15551 220 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 CD2BP2O95400 341 aaKnown RBP18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 GJB2P29033 226 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TNFSF9P41273 254 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 NCKAP1LP55160 1127 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ADCY1Q08828 1119 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 ZC3H14Q6PJT7 736 aaKnown RBP18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TPRG1Q6ZUI0 275 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 LRRC15Q8TF66 581 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 TMX3Q96JJ7 454 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 OSBPL6Q9BZF3 934 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 KCNG1Q9UIX4 513 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 PCDHB8Q9UN66 801 aa18.21■□□□□ 0.51
VPS9D1-AS1-201ENST00000562298 M0QZQ0 153 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MICAL2O94851 1124 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TARSP26639 723 aaKnown RBP18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LRPAP1P30533 357 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MATR3P43243 847 aaKnown RBP eCLIP18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TWF1Q12792 350 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZBTB6Q15916 424 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 FAM78AQ5JUQ0 283 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ARL6IP4Q66PJ3 421 aaKnown RBP18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 RNF19BQ6ZMZ0 732 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 PDZD4Q76G19 769 aaPredicted RBP18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 HS6ST3Q8IZP7 471 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CDK5RAP3Q96JB5 506 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 HEBP1Q9NRV9 189 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CEP72Q9P209 647 aa18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LARSQ9P2J5 1176 aaKnown RBP18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 AFF4Q9UHB7 1163 aaKnown RBP18.2■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 FAM189A1O60320 539 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MOSPD3O75425 235 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 VNN2O95498 520 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CLTAP09496 248 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CPB1P15086 417 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ID4P47928 161 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 FZD5Q13467 585 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 GRM2Q14416 872 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZBTB41Q5SVQ8 909 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 HAUS6Q7Z4H7 955 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 BEST2Q8NFU1 509 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 KCNN1Q92952 543 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 KIF12Q96FN5 646 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 BICD1Q96G01 975 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZSWIM3Q96MP5 696 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ASB16Q96NS5 453 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 REEP2Q9BRK0 252 aa18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 TIMM13Q9Y5L4 95 aaPredicted RBP18.19■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LACTBL1A8MY62 500 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 H3BQV1 296 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF197O14709 1029 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 LAMTOR5O43504 91 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 OAZ2O95190 189 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 OR4Q2P0C623 313 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 AARSP49588 968 aaKnown RBP eCLIP18.18■□□□□ 0.54e-6■■■■■ 30.6
VPS9D1-AS1-201ENST00000562298 EPHA5P54756 1037 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 FOXK2Q01167 660 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 YWHAHQ04917 246 aaPredicted RBP18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ENOX2Q16206 610 aaKnown RBP18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZNF528Q3MIS6 628 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 DNASE1L2Q92874 299 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CLDN23Q96B33 292 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ZFP14Q9HCL3 533 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 FBXO4Q9UKT5 387 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 ODF2LQ9ULJ1 636 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MAFFQ9ULX9 164 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 NCANO14594 1321 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CACNA1IQ9P0X4 2223 aa18.18■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 H0YCG3 227 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 HNRNPDLO14979 420 aaKnown RBP18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 GJA1P17302 382 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 CYP3A5P20815 502 aa18.17■□□□□ 0.5
VPS9D1-AS1-201ENST00000562298 MARCKSP29966 332 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms