RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 SUSD3Q96L08 255 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 NLRP4Q96MN2 994 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 IRX2Q9BZI1 471 aaPredicted RBP6.1□□□□□ -1.43
LINC01963-201ENST00000562038 PPP1R12CQ9BZL4 782 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 ZBP1Q9H171 429 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 SUGCTQ9HAC7 445 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 SPG21Q9NZD8 308 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 CEP72Q9P209 647 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 PCDHB12Q9Y5F1 795 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 CLUHO75153 1309 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 BDP1A6H8Y1 2624 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 TRAPPC3O43617 180 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 SOD2P04179 222 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 SPAG1Q07617 926 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 ZNF568Q3ZCX4 644 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 TPGS2Q68CL5 300 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 CRELD2Q6UXH1 353 aaPredicted RBP6.1□□□□□ -1.43
LINC01963-201ENST00000562038 LURAP1LQ8IV03 231 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 TMEM192Q8IY95 271 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 RASSF8Q8NHQ8 419 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 RTKNQ9BST9 563 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 UBXN6Q9BZV1 441 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 CYP3A43Q9HB55 503 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 MAGEC2Q9UBF1 373 aaPredicted RBP6.1□□□□□ -1.43
LINC01963-201ENST00000562038 FBXO9Q9UK97 447 aaPredicted RBP6.1□□□□□ -1.43
LINC01963-201ENST00000562038 MAN1B1Q9UKM7 699 aa6.1□□□□□ -1.43
LINC01963-201ENST00000562038 AGO2Q9UKV8 859 aaKnown RBP6.1□□□□□ -1.43
LINC01963-201ENST00000562038 TET1Q8NFU7 2136 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 OR6C75A6NL08 312 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 POM121CA8CG34 1229 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 SLC16A4O15374 487 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 OAZ2O95190 189 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ADRB1P08588 477 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 CTSAP10619 480 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 EEF1GP26641 437 aaKnown RBP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 MCM4P33991 863 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 TBX4P57082 545 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 CYP24A1Q07973 514 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 PLD1Q13393 1074 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 SMC1AQ14683 1233 aaKnown RBP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 FAM173BQ6P4H8 233 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 LRRC55Q6ZSA7 311 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ENOSF1Q7L5Y1 443 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ASCL5Q7RTU5 278 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 TMEFF1Q8IYR6 380 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 SCLYQ96I15 445 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 NUP62CLQ9H1M0 184 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 TBC1D13Q9NVG8 400 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 MYO6Q9UM54 1294 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ZFP37Q9Y6Q3 630 aaPredicted RBP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 GREB1Q4ZG55 1949 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 BAHCC1Q9P281 2608 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 SF3B1O75533 1304 aaKnown RBP eCLIP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ARL5CA6NH57 179 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ZNF233A6NK53 670 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 PPP1R3GB7ZBB8 358 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 INO80B-WBP1J3KQ70 363 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 PTGESO14684 152 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ZBTB39O15060 712 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 EDN1P05305 212 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 ADSSP30520 456 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 CCL23P55773 120 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 FKBP3Q00688 224 aaKnown RBP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 MTA1Q13330 715 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 UPP1Q16831 310 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 UVSSAQ2YD98 709 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 SV2CQ496J9 727 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 TTI2Q6NXR4 508 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 C1orf131Q8NDD1 294 aaKnown RBP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 IGSF21Q96ID5 467 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 FUCA2Q9BTY2 467 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 RPF1Q9H9Y2 349 aaKnown RBP6.09□□□□□ -1.43
LINC01963-201ENST00000562038 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 CNTN6Q9UQ52 1028 aa6.09□□□□□ -1.43
LINC01963-201ENST00000562038 UNC80Q8N2C7 3258 aa6.09□□□□□ -1.44
LINC01963-201ENST00000562038 A0A1B0GVL5 298 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 PRR5-ARHGAP8B1AHC4 643 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 NPTXRO95502 500 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 RECKO95980 971 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 THP07101 528 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 HNRNPA1P09651 372 aaKnown RBP eCLIP6.08□□□□□ -1.44
LINC01963-201ENST00000562038 NAT2P11245 290 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 HOXB8P17481 243 aaPredicted RBP6.08□□□□□ -1.44
LINC01963-201ENST00000562038 WARSP23381 471 aaKnown RBP6.08□□□□□ -1.44
LINC01963-201ENST00000562038 PSMC2P35998 433 aaKnown RBP6.08□□□□□ -1.44
LINC01963-201ENST00000562038 DEFB103AP81534 67 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 ARHGAP8P85298 464 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 STX1AQ16623 288 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 LONRF1Q17RB8 773 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 TWF2Q6IBS0 349 aaKnown RBP6.08□□□□□ -1.44
LINC01963-201ENST00000562038 PPP1R2P3Q6NXS1 205 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 TRIM67Q6ZTA4 783 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 EFHBQ8N7U6 833 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 GIPC2Q8TF65 315 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 EDEM3Q9BZQ6 932 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 NXF3Q9H4D5 531 aaKnown RBP6.08□□□□□ -1.44
LINC01963-201ENST00000562038 CYLDQ9NQC7 956 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 ANO10Q9NW15 660 aa6.08□□□□□ -1.44
LINC01963-201ENST00000562038 MARCH5Q9NX47 278 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms