RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 EPC1Q9H2F5 836 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 TRPV4Q9HBA0 871 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 DDX19AQ9NUU7 478 aaKnown RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 KIAA1024Q9UPX6 916 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 MRPS23Q9Y3D9 190 aaKnown RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 MTF2Q9Y483 593 aaPredicted RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.2□□□□□ -0.94
PALB2-202ENST00000561514 VWA8A3KMH1 1905 aa9.2□□□□□ -0.94
PALB2-202ENST00000561514 TDRD15B5MCY1 1934 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 MTCL1Q9Y4B5 1905 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 I3L4J1 428 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 NRG2O14511 850 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 LAMTOR5O43504 91 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 KINO60870 393 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 HIP1RO75146 1068 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 MOSPD3O75425 235 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 PTPN2P17706 415 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 CCR2P41597 374 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 AARSP49588 968 aaKnown RBP eCLIP9.19□□□□□ -0.94
PALB2-202ENST00000561514 YARSP54577 528 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 MLLT6P55198 1093 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 DMP1Q13316 513 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 PUM1Q14671 1186 aaKnown RBP eCLIP9.19□□□□□ -0.94
PALB2-202ENST00000561514 IL17AQ16552 155 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 RINT1Q6NUQ1 792 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 ZPBP2Q6X784 338 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 TPRG1Q6ZUI0 275 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 KCNK18Q7Z418 384 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 MAP4K3Q8IVH8 894 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 CCDC83Q8IWF9 413 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 LEMD2Q8NC56 503 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 ST13P5Q8NFI4 369 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 ING5Q8WYH8 240 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 ASB16Q96NS5 453 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 TARS2Q9BW92 718 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 FAM126AQ9BYI3 521 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 GTPBP4Q9BZE4 634 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 RAB34Q9BZG1 259 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 PLA2G2FQ9BZM2 168 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 RRAGDQ9NQL2 400 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 SH2B1Q9NRF2 756 aaPredicted RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 AFF4Q9UHB7 1163 aaKnown RBP9.19□□□□□ -0.94
PALB2-202ENST00000561514 FBXL5Q9UKA1 691 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 POLIQ9UNA4 740 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 INSL5Q9Y5Q6 135 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 FANCMQ8IYD8 2048 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 NOTCH4Q99466 2003 aa9.19□□□□□ -0.94
PALB2-202ENST00000561514 E9PMD0 336 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 H7C4K7 107 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 M0QZQ0 153 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ARNTLO00327 626 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZNF197O14709 1029 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 TOM1L1O75674 476 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 SEC24AO95486 1093 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ADRB2P07550 413 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 LIG1P18858 919 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 CYP3A5P20815 502 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 LRPAP1P30533 357 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 PEX3P56589 373 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 COL4A3Q01955 1670 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 MCL1Q07820 350 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ADCY1Q08828 1119 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 PTGDRQ13258 359 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 NOLC1Q14978 699 aaKnown RBP eCLIP9.18□□□□□ -0.94
PALB2-202ENST00000561514 UBXN2BQ14CS0 331 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZBTB6Q15916 424 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 SLC10A6Q3KNW5 377 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 FAM78AQ5JUQ0 283 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZBTB41Q5SVQ8 909 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 TANGO2Q6ICL3 276 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZNF280DQ6N043 979 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZNF852Q6ZMS4 543 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 TMEM161BQ8NDZ6 487 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 KCNG4Q8TDN1 519 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 SMARCD2Q92925 531 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 C18orf25Q96B23 403 aaPredicted RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 TCEAL4Q96EI5 215 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZSCAN31Q96LW9 406 aaPredicted RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 ACAP3Q96P50 834 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 KIF2CQ99661 725 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 OXCT2Q9BYC2 517 aaPredicted RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 CHRDQ9H2X0 955 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 PLEKHA5Q9HAU0 1116 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 POLD4Q9HCU8 107 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 SPATA6Q9NWH7 488 aaPredicted RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 ZSCAN32Q9NX65 697 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 KCND2Q9NZV8 630 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 KCNG1Q9UIX4 513 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 DNM3Q9UQ16 869 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 MRPS17Q9Y2R5 130 aaKnown RBP9.18□□□□□ -0.94
PALB2-202ENST00000561514 PCDHB6Q9Y5E3 794 aa9.18□□□□□ -0.94
PALB2-202ENST00000561514 NCANO14594 1321 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 CHD8Q9HCK8 2581 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 TTC26A0AVF1 554 aa9.17□□□□□ -0.94
PALB2-202ENST00000561514 MED19A0JLT2 244 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms