RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 LIMCH1Q9UPQ0 1083 aa12.95□□□□□ -0.34
CARMIL3-204ENST00000561354 DNM3Q9UQ16 869 aa12.95□□□□□ -0.34
CARMIL3-204ENST00000561354 NUB1Q9Y5A7 615 aa12.95□□□□□ -0.34
CARMIL3-204ENST00000561354 HIP1RO75146 1068 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 PSMC3P17980 439 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 CCR2P41597 374 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 EPHA5P54756 1037 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 ARPP19P56211 112 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 HMGN5P82970 282 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 MTAPQ13126 283 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 MAPK7Q13164 816 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 RSPO4Q2I0M5 234 aaPredicted RBP12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 CTXN3Q4LDR2 81 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 CYP4A22Q5TCH4 519 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 IQCEQ6IPM2 695 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 ZNF280DQ6N043 979 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 MPZL3Q6UWV2 235 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 ELMOD1Q8N336 334 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 APPL2Q8NEU8 664 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 SMARCD2Q92925 531 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 TCEAL4Q96EI5 215 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 ZNF512Q96ME7 567 aaPredicted RBP12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 CHRDQ9H2X0 955 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 AFF4Q9UHB7 1163 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 KCNG1Q9UIX4 513 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 SMG5Q9UPR3 1016 aaKnown RBP12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 GPR179Q6PRD1 2367 aa12.94□□□□□ -0.34
CARMIL3-204ENST00000561354 E9PMD0 336 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 LAD1O00515 517 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 MEFVO15553 781 aaPredicted RBP12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 TOM1L1O75674 476 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 U2AF2P26368 475 aaKnown RBP eCLIP12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 MCM4P33991 863 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 PTGDRQ13258 359 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 GNL2Q13823 731 aaKnown RBP12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 GRM2Q14416 872 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 SLC10A6Q3KNW5 377 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 KRT79Q5XKE5 535 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 RINT1Q6NUQ1 792 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 TSSK4Q6SA08 328 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 C1orf186Q6ZWK4 172 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 DEPDC1BQ8WUY9 529 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 DDX12PQ92771 950 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 C18orf25Q96B23 403 aaPredicted RBP12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 RUSC1Q9BVN2 902 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 TIPINQ9BVW5 301 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 GPR88Q9GZN0 384 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 TRPV4Q9HBA0 871 aa12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 ZNF334Q9HCZ1 680 aaPredicted RBP12.93□□□□□ -0.34
CARMIL3-204ENST00000561354 PRR5-ARHGAP8B1AHC4 643 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 NRG2O14511 850 aaPredicted RBP12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 CITO14578 2027 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 MOSPD3O75425 235 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 TDGF1P13385 188 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 PRPHP41219 470 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 TOB1P50616 345 aaPredicted RBP12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 NRLP54845 237 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 ARHGAP8P85298 464 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 LMNB2Q03252 620 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 TWF1Q12792 350 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 STRN3Q13033 797 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 NBR1Q14596 966 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 PPP2R5DQ14738 602 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 VITQ6UXI7 678 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 ZPBP2Q6X784 338 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 KCTD17Q8N5Z5 321 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 BEST2Q8NFU1 509 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 SPIRE2Q8WWL2 714 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 FAM3CQ92520 227 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 ZSWIM3Q96MP5 696 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 OXCT2Q9BYC2 517 aaPredicted RBP12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 PLEKHA5Q9HAU0 1116 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 CEP72Q9P209 647 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 NDRG2Q9UN36 371 aaKnown RBP12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 PCDHB8Q9UN66 801 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 CEP250Q9BV73 2442 aa12.92□□□□□ -0.34
CARMIL3-204ENST00000561354 SFI1A8K8P3 1242 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 M0QZQ0 153 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 SLC16A4O15374 487 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 OAZ2O95190 189 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 TGM1P22735 817 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 GUCY2CP25092 1073 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 MARCKSP29966 332 aaPredicted RBP12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 GDI1P31150 447 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 NOLC1Q14978 699 aaKnown RBP eCLIP12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 MFSD6LQ8IWD5 586 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 HS6ST3Q8IZP7 471 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 FAM184AQ8NB25 1140 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 ZSCAN18Q8TBC5 510 aaPredicted RBP12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 ZBTB45Q96K62 511 aaPredicted RBP12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 ZSCAN31Q96LW9 406 aaPredicted RBP12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 LMAN1LQ9HAT1 526 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 ASAH2Q9NR71 780 aa12.91□□□□□ -0.34
CARMIL3-204ENST00000561354 PCDHB6Q9Y5E3 794 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms