RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 LILRA6Q6PI73 481 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 ALKAL1Q6UXT8 129 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 RSPO2Q6UXX9 243 aaPredicted RBP8.11□□□□□ -1.11
ZEB1-223ENST00000561304 BRAPQ7Z569 592 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 CYP4X1Q8N118 509 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 TDRD5Q8NAT2 981 aaKnown RBP8.11□□□□□ -1.11
ZEB1-223ENST00000561304 LNX1Q8TBB1 728 aaPredicted RBP8.11□□□□□ -1.11
ZEB1-223ENST00000561304 C18orf25Q96B23 403 aaPredicted RBP8.11□□□□□ -1.11
ZEB1-223ENST00000561304 SNX27Q96L92 541 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
ZEB1-223ENST00000561304 CLSTN3Q9BQT9 956 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 REEP2Q9BRK0 252 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 MRPL4Q9BYD3 311 aaKnown RBP8.11□□□□□ -1.11
ZEB1-223ENST00000561304 NT5C3AQ9H0P0 336 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 FNIP2Q9P278 1114 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 ANKFY1Q9P2R3 1169 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 PATJQ8NI35 1801 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 TICRRQ7Z2Z1 1910 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 FRYLO94915 3013 aa8.11□□□□□ -1.11
ZEB1-223ENST00000561304 CFAP54Q96N23 3096 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CCDC195A0A1B0GUA6 201 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TMEM189-UBE2V1I3L0A0 370 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SYT1P21579 422 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TKTP29401 623 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 MARCKSP29966 332 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 NCKAP1LP55160 1127 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 NOLC1Q14978 699 aaKnown RBP eCLIP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 ZBTB41Q5SVQ8 909 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 MPZL3Q6UWV2 235 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 C15orf39Q6ZRI6 1047 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CCDC149Q6ZUS6 474 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 BMP8AQ7Z5Y6 402 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 GPBP1Q86WP2 473 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CEP57Q86XR8 500 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 ZDHHC14Q8IZN3 488 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 PRSS33Q8NF86 280 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 ST13P5Q8NFI4 369 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CMASQ8NFW8 434 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 PIK3R5Q8WYR1 880 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 RAD54LQ92698 747 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 PBXIP1Q96AQ6 731 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 FAM122AQ96E09 287 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 EPSTI1Q96J88 318 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CDK5RAP3Q96JB5 506 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 MRGPRX2Q96LB1 330 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 AK8Q96MA6 479 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CLIC6Q96NY7 704 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 FIZ1Q96SL8 496 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 NTPCRQ9BSD7 190 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TTPALQ9BTX7 342 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TIPINQ9BVW5 301 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CNTN3Q9P232 1028 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TUBGCP4Q9UGJ1 667 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 FBXO2Q9UK22 296 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 FBXW11Q9UKB1 542 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SSX2IPQ9Y2D8 614 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CLUHO75153 1309 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 NUP210Q8TEM1 1887 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TISP43B9A030 160 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 FAM189A1O60320 539 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CXCL8P10145 99 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 MCF2P10911 925 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 FGFR3P22607 806 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 LONP1P36776 959 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 TNFSF9P41273 254 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 ZNF131P52739 623 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SH3BP2P78314 561 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 NTHL1P78549 312 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SPAG1Q07617 926 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SLC10A6Q3KNW5 377 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SLC39A4Q6P5W5 647 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 GPR65Q8IYL9 337 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 ARMC2Q8NEN0 867 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SNIP1Q8TAD8 396 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 RSAD2Q8WXG1 361 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SMG7Q92540 1137 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 MYADMQ96S97 322 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 CCDC94Q9BW85 323 aaPredicted RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 IKZF4Q9H2S9 585 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 C17orf75Q9HAS0 396 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 WDR6Q9NNW5 1121 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 SORCS3Q9UPU3 1222 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 MTMR6Q9Y217 621 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 USTQ9Y2C2 406 aa8.1□□□□□ -1.11
ZEB1-223ENST00000561304 RBM19Q9Y4C8 960 aaKnown RBP8.1□□□□□ -1.11
ZEB1-223ENST00000561304 ZNF638Q14966 1978 aaKnown RBP8.09□□□□□ -1.11
ZEB1-223ENST00000561304 FANCMQ8IYD8 2048 aa8.09□□□□□ -1.11
ZEB1-223ENST00000561304 A0A087X0B3 334 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 K7ENM7 598 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 PODXLO00592 558 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 SLC26A4O43511 780 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 NARSO43776 548 aaKnown RBP8.09□□□□□ -1.12
ZEB1-223ENST00000561304 TOM1L1O75674 476 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 B3GAT3O94766 335 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 KCNE1P15382 129 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 NMT1P30419 496 aaKnown RBP8.09□□□□□ -1.12
ZEB1-223ENST00000561304 UBA7P41226 1012 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 GUCY2FP51841 1108 aa8.09□□□□□ -1.12
ZEB1-223ENST00000561304 YARSP54577 528 aaKnown RBP8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms