RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 KRT17Q04695 432 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 PPP3CAQ08209 521 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 NCAPHQ15003 741 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 IQCB1Q15051 598 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 DCAF17Q5H9S7 520 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-221ENST00000561276 C9orf57Q5W0N0 161 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 CD300LGQ6UXG3 332 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TRAPPC11Q7Z392 1133 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
LRRC28-221ENST00000561276 FAM114A1Q8IWE2 563 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TRIM59Q8IWR1 403 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 DHX40Q8IX18 779 aaKnown RBP11.1□□□□□ -0.63
LRRC28-221ENST00000561276 SLC39A11Q8N1S5 342 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 C3orf58Q8NDZ4 430 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 ARNTL2Q8WYA1 636 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 SLC35C1Q96A29 364 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 CNOT6LQ96LI5 555 aaKnown RBP11.1□□□□□ -0.63
LRRC28-221ENST00000561276 TSPY26PQ9H489 355 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 MMRN2Q9H8L6 949 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 ADAM28Q9UKQ2 775 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
LRRC28-221ENST00000561276 BECN2A8MW95 431 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 KCNJ18B7U540 433 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 H3BNC9 293 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 PPEF2O14830 753 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 STX10O60499 249 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 PHACTR2O75167 634 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 KIF4AO95239 1232 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 CDK11BP21127 795 aaKnown RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 POLR2BP30876 1174 aaKnown RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 PPM1AP35813 382 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 LILRA4P59901 499 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 RBP5P82980 135 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 PLCB3Q01970 1234 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 BIRC3Q13489 604 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 KCNJ12Q14500 433 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 TCP11X2Q5H9J9 407 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 CDKAL1Q5VV42 579 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 C15orf39Q6ZRI6 1047 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 SV2AQ7L0J3 742 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 SPPL3Q8TCT6 385 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 HASPINQ8TF76 798 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 BCL7CQ8WUZ0 217 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 C11orf84Q9BUA3 381 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 CBX8Q9HC52 389 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 ALG13Q9NP73 1137 aaKnown RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 MARCH5Q9NX47 278 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 MAGEC2Q9UBF1 373 aaPredicted RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
LRRC28-221ENST00000561276 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 RANBP2P49792 3224 aaKnown RBP11.09□□□□□ -0.63
LRRC28-221ENST00000561276 TMEM189-UBE2V1I3L0A0 370 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 RFXAPO00287 272 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TRAPPC3O43617 180 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 VNN1O95497 513 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 GTF2H1P32780 548 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 BRCC3P46736 316 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 KCNH2Q12809 1159 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 GPM6BQ13491 265 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TRPC3Q13507 836 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 ZACNQ401N2 412 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TIGD5Q53EQ6 642 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TDRD10Q5VZ19 366 aaKnown RBP11.08□□□□□ -0.64
LRRC28-221ENST00000561276 KRT39Q6A163 491 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TAS1R1Q7RTX1 841 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 DDX53Q86TM3 631 aaKnown RBP11.08□□□□□ -0.64
LRRC28-221ENST00000561276 LUZP1Q86V48 1076 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TUBGCP2Q9BSJ2 902 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 ANP32EQ9BTT0 268 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 GPR62Q9BZJ7 368 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 HSD3B7Q9H2F3 369 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TTYH1Q9H313 450 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TMEM8AQ9HCN3 771 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 PUF60Q9UHX1 559 aaKnown RBP11.08□□□□□ -0.64
LRRC28-221ENST00000561276 NUB1Q9Y5A7 615 aa11.08□□□□□ -0.64
LRRC28-221ENST00000561276 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
LRRC28-221ENST00000561276 TMEM265A0A087WTH1 108 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 KPNA7A9QM74 516 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 I3L4J1 428 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 GRM6O15303 877 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 EFEMP2O95967 443 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 EEF1GP26641 437 aaKnown RBP11.07□□□□□ -0.64
LRRC28-221ENST00000561276 PNPLA4P41247 253 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 FMO5P49326 533 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 TAF6P49848 677 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 MYL6P60660 151 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 MYO1EQ12965 1108 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 MAN2A1Q16706 1144 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 SGSM1Q2NKQ1 1148 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 CBWD6Q4V339 395 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 CBWD3Q5JTY5 395 aa11.07□□□□□ -0.64
LRRC28-221ENST00000561276 CBWD5Q5RIA9 395 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms