RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CPA1P15085 419 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 VEGFAP15692 232 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 PORP16435 677 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 ATF7P17544 494 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 EN2P19622 333 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 HLA-DPA1P20036 260 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CST5P28325 142 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 ADSLP30566 484 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 SDHAP31040 664 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 HOXC13P31276 330 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 AKT1P31749 480 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PPARGP37231 505 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 HNF4AP41235 474 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 WASP42768 502 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MCAMP43121 646 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CTSKP43235 329 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 BAG6P46379 1132 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MAN2A2P49641 1150 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RBM5P52756 815 aaKnown RBP eCLIP2.25□□□□□ -2.05
RTF1-207ENST00000561076 BCAT1P54687 386 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 NKX6-1P78426 367 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 PPARDQ03181 441 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.25□□□□□ -2.05
RTF1-207ENST00000561076 CUL4BQ13620 913 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 SEC23BQ15437 767 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ADRM1Q16186 407 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 NFIL3Q16649 462 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CTXN3Q4LDR2 81 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 FLYWCH1Q4VC44 716 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 AMOTQ4VCS5 1084 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CCDC178Q5BJE1 867 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 C1orf141Q5JVX7 400 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 FAM69AQ5T7M9 428 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 KIAA1614Q5VZ46 1190 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CNSTQ6PJW8 725 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PET117Q6UWS5 81 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RNF111Q6ZNA4 994 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TMTC3Q6ZXV5 915 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 UNC13DQ70J99 1090 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 LRRC8DQ7L1W4 858 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RRAGAQ7L523 313 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RAB11FIP2Q7L804 512 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 TSPYL5Q86VY4 417 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 FAM129CQ86XR2 697 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 COL23A1Q86Y22 540 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 SIAH1Q8IUQ4 282 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 DIS3L2Q8IYB7 885 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 CCDC170Q8IYT3 715 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 MFSD4AQ8N468 514 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 LZTR1Q8N653 840 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ANKRD44Q8N8A2 993 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RNF152Q8N8N0 203 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 POMGNT2Q8NAT1 580 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 GLB1L3Q8NCI6 653 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 GALNT11Q8NCW6 608 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 NLGN2Q8NFZ4 835 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 OR8H1Q8NGG4 311 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PLBD2Q8NHP8 589 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 GOT1L1Q8NHS2 421 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 UHMK1Q8TAS1 419 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 GSDMBQ8TAX9 411 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ETNPPLQ8TBG4 499 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PHOSPHO1Q8TCT1 267 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CCHCR1Q8TD31 782 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 OTUD7AQ8TE49 926 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 SSH3Q8TE77 659 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 WDR60Q8WVS4 1066 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 KBTBD7Q8WVZ9 684 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CPT1BQ92523 772 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TAF4BQ92750 862 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 STAMQ92783 540 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 GRAMD1AQ96CP6 724 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 C18orf8Q96DM3 657 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ZNF845Q96IR2 970 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 P2RX7Q99572 595 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 LBHD1Q9BQE6 289 aaPredicted RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 DBNDD2Q9BQY9 259 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RTKNQ9BST9 563 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 HDAC8Q9BY41 377 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CEP41Q9BYV8 373 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 FOXP3Q9BZS1 431 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 ZNF518BQ9C0D4 1074 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 KIAA1683Q9H0B3 1180 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 SEMA4AQ9H3S1 761 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 XAB2Q9HCS7 855 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 FAM105AQ9NUU6 356 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TMEM140Q9NV12 185 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 RGL1Q9NZL6 768 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 TMOD4Q9NZQ9 345 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CALCOCO1Q9P1Z2 691 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CPSF2Q9P2I0 782 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 EPS15L1Q9UBC2 864 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 FTSJ1Q9UET6 329 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 PRSS50Q9UI38 385 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 DUSP13Q9UII6 198 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 CNOT7Q9UIV1 285 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 HOOK1Q9UJC3 728 aaKnown RBP2.25□□□□□ -2.05
RTF1-207ENST00000561076 GGA1Q9UJY5 639 aa2.25□□□□□ -2.05
RTF1-207ENST00000561076 BAG5Q9UL15 447 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms