RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 MCM4P33991 863 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
LMX1B-204ENST00000561065 TMEM105Q8N8V8 129 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 KIF12Q96FN5 646 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 PHOX2BQ99453 314 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 PLEKHA5Q9HAU0 1116 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 IGSF9Q9P2J2 1179 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 NUB1Q9Y5A7 615 aa17.38■□□□□ 0.37
LMX1B-204ENST00000561065 SPTLC2O15270 562 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 YEATS4O95619 227 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 FSHRP23945 695 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 PPP2R3AQ06190 1150 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 HTR4Q13639 388 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 SV2BQ7L1I2 683 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 ITFG1Q8TB96 612 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 DDX12PQ92771 950 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 MSTO1Q9BUK6 570 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 STRA6Q9BX79 667 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 ST6GALNAC4Q9H4F1 302 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 FBXL5Q9UKA1 691 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 CPSF3Q9UKF6 684 aaKnown RBP17.37■□□□□ 0.37
LMX1B-204ENST00000561065 POLIQ9UNA4 740 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 TCHHQ07283 1943 aa17.37■□□□□ 0.37
LMX1B-204ENST00000561065 ANHXE9PGG2 379 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 NRG2O14511 850 aaPredicted RBP17.36■□□□□ 0.37
LMX1B-204ENST00000561065 ABLIM3O94929 683 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 NFICP08651 508 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 NPR3P17342 541 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 AARSP49588 968 aaKnown RBP eCLIP17.36■□□□□ 0.37
LMX1B-204ENST00000561065 KCNA1Q09470 495 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 POTEHQ6S545 545 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 KCNG4Q8TDN1 519 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.36■□□□□ 0.37
LMX1B-204ENST00000561065 DNMT3BQ9UBC3 853 aaKnown RBP17.36■□□□□ 0.37
LMX1B-204ENST00000561065 UBQLN1Q9UMX0 589 aaKnown RBP17.36■□□□□ 0.37
LMX1B-204ENST00000561065 NUMBLQ9Y6R0 609 aa17.36■□□□□ 0.37
LMX1B-204ENST00000561065 VPS13AQ96RL7 3174 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 ARHGEF37A1IGU5 675 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 M0QZQ0 153 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 SEC24AO95486 1093 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 F13A1P00488 732 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 CYP3A5P20815 502 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 CASP5P51878 434 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 ARPP19P56211 112 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 AMPD3Q01432 767 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 SLC5A9Q2M3M2 681 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 UVSSAQ2YD98 709 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 JADE1Q6IE81 842 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 ZNF720Q7Z2F6 126 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 SLC44A3Q8N4M1 653 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 LINC00301Q8NCQ3 95 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 ZNF461Q8TAF7 563 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 FGF13Q92913 245 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 FGF14Q92915 247 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 PYM1Q9BRP8 204 aaKnown RBP17.35■□□□□ 0.37
LMX1B-204ENST00000561065 RPP25Q9BUL9 199 aaKnown RBP17.35■□□□□ 0.37
LMX1B-204ENST00000561065 RPF1Q9H9Y2 349 aaKnown RBP17.35■□□□□ 0.37
LMX1B-204ENST00000561065 CDH7Q9ULB5 785 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 PCDHB8Q9UN66 801 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 STYXL1Q9Y6J8 313 aa17.35■□□□□ 0.37
LMX1B-204ENST00000561065 FRMD3A2A2Y4 597 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 KRBA1A5PL33 1030 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 XYLBO75191 536 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 VNN2O95498 520 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 CFHP08603 1231 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 ADSSP30520 456 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 STAT6P42226 847 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 ACOT2P49753 483 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 WNT7BP56706 349 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 KYAT1Q16773 422 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 CTXN3Q4LDR2 81 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 SPATA1Q5VX52 437 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 ZNF280DQ6N043 979 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 PARM1Q6UWI2 310 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 CRELD2Q6UXH1 353 aaPredicted RBP17.34■□□□□ 0.37
LMX1B-204ENST00000561065 NPAS3Q8IXF0 933 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 SPRYD3Q8NCJ5 442 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 ZSWIM2Q8NEG5 633 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 ING5Q8WYH8 240 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 PANK2Q9BZ23 570 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 CUEDC2Q9H467 287 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 TBC1D7Q9P0N9 293 aa17.34■□□□□ 0.37
LMX1B-204ENST00000561065 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
LMX1B-204ENST00000561065 TIMM13Q9Y5L4 95 aaPredicted RBP17.34■□□□□ 0.37
LMX1B-204ENST00000561065 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.34■□□□□ 0.37
LMX1B-204ENST00000561065 H7C4K7 107 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 SPTLC1O15269 473 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 CUTAO60888 179 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 SRFP11831 508 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 ATF2P15336 505 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 PTPN5P54829 565 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 E2F4Q16254 413 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 PABPC1LQ4VXU2 614 aaKnown RBP17.33■□□□□ 0.36
LMX1B-204ENST00000561065 FOXD4L5Q5VV16 416 aaPredicted RBP17.33■□□□□ 0.36
LMX1B-204ENST00000561065 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
LMX1B-204ENST00000561065 ALYREFQ86V81 257 aaKnown RBP17.33■□□□□ 0.36
LMX1B-204ENST00000561065 EFCAB13Q8IY85 973 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 SIX5Q8N196 739 aa17.33■□□□□ 0.36
LMX1B-204ENST00000561065 PDILTQ8N807 584 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms