RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 ZSCAN18Q8TBC5 510 aaPredicted RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 OXER1Q8TDS5 423 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 PIGOQ8TEQ8 1089 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 BSNDQ8WZ55 320 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 TMEM121BQ9BXQ6 578 aaPredicted RBP10.93□□□□□ -0.66
TPM1-225ENST00000560679 CCDC113Q9H0I3 377 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 CEP72Q9P209 647 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 WASF3Q9UPY6 502 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 GDAQ9Y2T3 454 aa10.93□□□□□ -0.66
TPM1-225ENST00000560679 LOC400499M0QZD8 3231 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 NUP210Q8TEM1 1887 aaPredicted RBP10.92□□□□□ -0.66
TPM1-225ENST00000560679 A0A087WWV3 80 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 ZNF197O14709 1029 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 ATF2P15336 505 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 HOXA6P31267 233 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 RAP1GAPP47736 663 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 MLLT6P55198 1093 aaPredicted RBP10.92□□□□□ -0.66
TPM1-225ENST00000560679 CCINQ13939 588 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 LRRC32Q14392 662 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 ACAP1Q15027 740 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 TEAD2Q15562 447 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 BMP2KLQ5H9B9 411 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 PSAPL1Q6NUJ1 521 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 PKN3Q6P5Z2 889 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 MAEAQ7L5Y9 396 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 KBTBD6Q86V97 674 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 FAM177A1Q8N128 213 aaPredicted RBP10.92□□□□□ -0.66
TPM1-225ENST00000560679 C12orf50Q8NA57 414 aaPredicted RBP10.92□□□□□ -0.66
TPM1-225ENST00000560679 SHKBP1Q8TBC3 707 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 MSANTD3Q96H12 275 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 LSM14BQ9BX40 385 aaKnown RBP10.92□□□□□ -0.66
TPM1-225ENST00000560679 CYP4F11Q9HBI6 524 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 GJB4Q9NTQ9 266 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 FREM2Q5SZK8 3169 aa10.92□□□□□ -0.66
TPM1-225ENST00000560679 CCDC194A0A1B0GVG4 234 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 MYBPHLA2RUH7 354 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 SPECC1L-ADORA2AF8WAN1 911 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 ELF1P32519 619 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 CTHP32929 405 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 HSPA4P34932 840 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 ARPP19P56211 112 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 FCHO2Q0JRZ9 810 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 TWF1Q12792 350 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 PRPF4BQ13523 1007 aaKnown RBP10.91□□□□□ -0.66
TPM1-225ENST00000560679 MRPL58Q14197 206 aaKnown RBP10.91□□□□□ -0.66
TPM1-225ENST00000560679 TCEAL6Q6IPX3 200 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 PIK3AP1Q6ZUJ8 805 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 TMC8Q8IU68 726 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 ZBTB8OSQ8IWT0 167 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 SLFN12Q8IYM2 578 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 KDF1Q8NAX2 398 aaPredicted RBP10.91□□□□□ -0.66
TPM1-225ENST00000560679 GAB3Q8WWW8 586 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 TCEAL3Q969E4 200 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 LOXL4Q96JB6 756 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 UROC1Q96N76 676 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 LRRC3BQ96PB8 259 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 LRRC3Q9BY71 257 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 FBXL5Q9UKA1 691 aa10.91□□□□□ -0.66
TPM1-225ENST00000560679 ACKR2O00590 384 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 WNT7AO00755 349 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 GIPC1O14908 333 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 CHADO15335 359 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 TRAPPC3O43617 180 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 EXTL3O43909 919 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 DTNBO60941 627 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 VNN2O95498 520 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 MYL4P12829 197 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 SPINK2P20155 84 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 PXNP49023 591 aaPredicted RBP10.9□□□□□ -0.66
TPM1-225ENST00000560679 DGKKQ5KSL6 1271 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 STXBP5Q5T5C0 1151 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 CYP4A22Q5TCH4 519 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 CEP120Q8N960 986 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 TTC8Q8TAM2 541 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 CSGALNACT1Q8TDX6 532 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 ZFYVE19Q96K21 471 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 CCDC43Q96MW1 224 aaKnown RBP10.9□□□□□ -0.66
TPM1-225ENST00000560679 ZMAT2Q96NC0 199 aaKnown RBP10.9□□□□□ -0.66
TPM1-225ENST00000560679 MKNK1Q9BUB5 465 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 KIFC3Q9BVG8 833 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 C8orf33Q9H7E9 229 aaPredicted RBP10.9□□□□□ -0.66
TPM1-225ENST00000560679 ASAH2Q9NR71 780 aa10.9□□□□□ -0.66
TPM1-225ENST00000560679 SMIM28A0A1B0GU29 152 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 PODXLO00592 558 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 MEFVO15553 781 aaPredicted RBP10.89□□□□□ -0.67
TPM1-225ENST00000560679 MARCH6O60337 910 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 RPP40O75818 363 aaKnown RBP10.89□□□□□ -0.67
TPM1-225ENST00000560679 TOP3BO95985 862 aaKnown RBP10.89□□□□□ -0.67
TPM1-225ENST00000560679 SPATA31C1P0DKV0 1188 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 MPLP40238 635 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 KPNA1P52294 538 aaPredicted RBP10.89□□□□□ -0.67
TPM1-225ENST00000560679 PON2Q15165 354 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 MAPK6Q16659 721 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 DCAF4L1Q3SXM0 396 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 XKR4Q5GH76 650 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 TPGS2Q68CL5 300 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 C1orf228Q6PIY5 440 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 CACNA2D4Q7Z3S7 1137 aa10.89□□□□□ -0.67
TPM1-225ENST00000560679 RALGPS2Q86X27 583 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms