RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 USP25Q9UHP3 1055 aa14.07□□□□□ -0.16
CTDSPL2-209ENST00000560620 VWA8A3KMH1 1905 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 PVALEFA0A1B0GWK0 134 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 C19orf67A6NJJ6 358 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 H7C4K7 107 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 SYN3O14994 580 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 EIF3DO15371 548 aaKnown RBP eCLIP14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 ACTN4O43707 911 aaKnown RBP14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 IL18RAPO95256 599 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 ALADP13716 330 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 LRPAP1P30533 357 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 NDUFA8P51970 172 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 TFAMQ00059 246 aaKnown RBP14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZBTB6Q15916 424 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 CTXN3Q4LDR2 81 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 VARS2Q5ST30 1063 aaKnown RBP14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 SPATA1Q5VX52 437 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 CNNM4Q6P4Q7 775 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 C15orf39Q6ZRI6 1047 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 GPR149Q86SP6 731 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 USP37Q86T82 979 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 APPL2Q8NEU8 664 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 SMG7Q92540 1137 aaKnown RBP14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 SUSD3Q96L08 255 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 EPHX3Q9H6B9 360 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 MTRRQ9UBK8 725 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 POLIQ9UNA4 740 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 DERAQ9Y315 318 aa14.06□□□□□ -0.16
CTDSPL2-209ENST00000560620 NCOR1O75376 2440 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 LOC730098B7Z3J9 87 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 ADAM12O43184 909 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 DCXO43602 365 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 EXTL3O43909 919 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 ELF1P32519 619 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 PPM1LQ5SGD2 360 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZNF280DQ6N043 979 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 LILRA6Q6PI73 481 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 CRELD2Q6UXH1 353 aaPredicted RBP14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 GPD1LQ8N335 351 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 TDRD5Q8NAT2 981 aaKnown RBP14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZSWIM2Q8NEG5 633 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 FEZF2Q8TBJ5 459 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 HDAC7Q8WUI4 952 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 CCDC47Q96A33 483 aaKnown RBP14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 C1QTNF1Q9BXJ1 281 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 DPP3Q9NY33 737 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 MUTYHQ9UIF7 546 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 HPSEQ9Y251 543 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 R3HCC1Q9Y3T6 440 aaKnown RBP14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 C2CD2Q9Y426 696 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 TIMM13Q9Y5L4 95 aaPredicted RBP14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 BACE2Q9Y5Z0 518 aa14.05□□□□□ -0.16
CTDSPL2-209ENST00000560620 BDP1A6H8Y1 2624 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 A0A1W2PQ27 194 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 A0A1W2PQ64 194 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 A0A1W2PQD8 194 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 PPEF2O14830 753 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 KIAA0391O15091 583 aaKnown RBP14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 CLIC2O15247 247 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZMYND10O75800 440 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 C8AP07357 584 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 ADRB2P07550 413 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 CPB1P15086 417 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 CYP2J2P51589 502 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 YWHAHQ04917 246 aaPredicted RBP14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 RAB33AQ14088 237 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 C9orf57Q5W0N0 161 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 HS2ST1Q7LGA3 356 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 BRSK2Q8IWQ3 736 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 RDH13Q8NBN7 331 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 SLC7A14Q8TBB6 771 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZNF507Q8TCN5 953 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 CACTINQ8WUQ7 758 aaKnown RBP14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 ACSF2Q96CM8 615 aaPredicted RBP14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZDHHC7Q9NXF8 308 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 FBXW11Q9UKB1 542 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 PCDHB8Q9UN66 801 aa14.04□□□□□ -0.16
CTDSPL2-209ENST00000560620 MTCL1Q9Y4B5 1905 aaKnown RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZNF233A6NK53 670 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 C2CD4DB7Z1M9 353 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 PI4K2BG5E9Z4 385 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 PRRG1O14668 218 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 ZNF202O95125 648 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 C1RP00736 705 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 RPN1P04843 607 aaKnown RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 MYL1P05976 194 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 KRT19P08727 400 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 TMEM191BP0C7N4 346 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 ODC1P11926 461 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 GBP2P32456 591 aaPredicted RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 LILRA4P59901 499 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 POU5F1Q01860 360 aaKnown RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 ROR1Q01973 937 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 KMT5BQ4FZB7 885 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 RSPO2Q6UXX9 243 aaPredicted RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 EPM2AIP1Q7L775 607 aaPredicted RBP14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 NT5DC4Q86YG4 428 aa14.03□□□□□ -0.16
CTDSPL2-209ENST00000560620 EFCAB13Q8IY85 973 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms