RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TMEM143Q96AN5 459 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 ATP6V1G3Q96LB4 118 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 ASCC2Q9H1I8 757 aaPredicted RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 SMARCAD1Q9H4L7 1026 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 LRRC19Q9H756 370 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 TOPORSQ9NS56 1045 aaPredicted RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 MTRF1LQ9UGC7 380 aaKnown RBP10.37□□□□□ -0.75
RTF1-206ENST00000560447 AMACRQ9UHK6 382 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 FAM153AQ9UHL3 310 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 PNMA3Q9UL41 463 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 SLC45A1Q9Y2W3 748 aa10.37□□□□□ -0.75
RTF1-206ENST00000560447 ESYT3A0FGR9 886 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ZSCAN5CA6NGD5 496 aaPredicted RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 NDC80O14777 642 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 TTI1O43156 1089 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 MSCO60682 206 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 IL18RAPO95256 599 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 VNN1O95497 513 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ASS1P00966 412 aaKnown RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 NUDT17P0C025 328 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ITGA4P13612 1032 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 MAPK4P31152 587 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 HSD17B3P37058 310 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 PTGIRP43119 386 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ZNF132P52740 706 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 GYS2P54840 703 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 SOX10P56693 466 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 RNASE9P60153 205 aaKnown RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 SP4Q02446 784 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 CAV1Q03135 178 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 MCL1Q07820 350 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 MAPK6Q16659 721 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 CEP128Q6ZU80 1094 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 MON1BQ7L1V2 547 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 TMC3Q7Z5M5 1100 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 SPATS2Q86XZ4 545 aaKnown RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 DNAAF5Q86Y56 855 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 JAMLQ86YT9 394 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 ZNF526Q8TF50 670 aaPredicted RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 GRK7Q8WTQ7 553 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 PIK3R5Q8WYR1 880 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 GDAP1L1Q96MZ0 367 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 FMO2Q99518 471 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 GPR20Q99678 358 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ACO2Q99798 780 aaKnown RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 TARS2Q9BW92 718 aaKnown RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 CAPS2Q9BXY5 557 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 TXLNGYQ9BZA5 131 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 FAM107BQ9H098 131 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 TMBIM4Q9HC24 238 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 PLAAQ9Y263 795 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 ARIH1Q9Y4X5 557 aaPredicted RBP10.36□□□□□ -0.75
RTF1-206ENST00000560447 COL1A2P08123 1366 aa10.36□□□□□ -0.75
RTF1-206ENST00000560447 PASKQ96RG2 1323 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 PLXNB2O15031 1838 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 H0YGN5 161 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 MYO1FO00160 1098 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 NOP56O00567 594 aaKnown RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 ACKR2O00590 384 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 SOCS7O14512 581 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 DAPK3O43293 454 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 THAP12O43422 761 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 FAM189A1O60320 539 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 PROSCO94903 275 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 PRKCBP05771 671 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 CALB1P05937 261 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 MYZAPP0CAP1 466 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 COL9A1P20849 921 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 PROZP22891 400 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 COILP38432 576 aaPredicted RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 CETN2P41208 172 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 GUCY2FP51841 1108 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 CDR1P51861 262 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 HNRNPH2P55795 449 aaKnown RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 NOMO3P69849 1222 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 NOP14P78316 857 aaKnown RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 CCNA1P78396 465 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 NCOA4Q13772 614 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 TTLL4Q14679 1199 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 SLMAPQ14BN4 828 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 FAM187BQ17R55 369 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 DUOXA2Q1HG44 320 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 TTMPQ5BVD1 217 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 ZNF484Q5JVG2 852 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 PLEKHA7Q6IQ23 1121 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 CCDC62Q6P9F0 684 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 TSHZ1Q6ZSZ6 1077 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 HOOK3Q86VS8 718 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 PRELID2Q8N945 189 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 C3orf20Q8ND61 904 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 RIN2Q8WYP3 895 aaPredicted RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 KRT35Q92764 455 aa10.35□□□□□ -0.75
RTF1-206ENST00000560447 MAGOHBQ96A72 148 aaKnown RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
RTF1-206ENST00000560447 FGD4Q96M96 766 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms