RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 DAAM2Q86T65 1068 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 RNF10Q8N5U6 811 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 NOA1Q8NC60 698 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 OSBPL9Q96SU4 736 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 KATNAL1Q9BW62 490 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 XYLT2Q9H1B5 865 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 PDCL3Q9H2J4 239 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 SNX12Q9UMY4 172 aa11.66□□□□□ -0.54
SNRPA1-211ENST00000560433 TMEM110-MUSTN1A8MSY1 372 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 ADAMTS4O75173 837 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 RHOXF2BP0C7M4 288 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 GNA15P30679 374 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 CDR2Q01850 454 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 CPNE8Q86YQ8 564 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 RBBP8NLQ8NC74 664 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 TPCN2Q8NHX9 752 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 CAGE1Q8TC20 777 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 RAET1EQ8TD07 263 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 CYFIP2Q96F07 1278 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 KIF12Q96FN5 646 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 RHOXF2Q9BQY4 288 aa11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 TRIM6Q9C030 488 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-211ENST00000560433 CITO14578 2027 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 PPEF2O14830 753 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 POLR2BP30876 1174 aaKnown RBP11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 ENPEPQ07075 957 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 NFX1Q12986 1120 aaKnown RBP11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 TXLNBQ8N3L3 684 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 C18orf25Q96B23 403 aaPredicted RBP11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 ZBTB9Q96C00 473 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 MTG1Q9BT17 334 aaPredicted RBP11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 PLEKHA4Q9H4M7 779 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 SPC25Q9HBM1 224 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 CISHQ9NSE2 258 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 CTTNBP2NLQ9P2B4 639 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 SRRDQ9UH36 339 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.55
SNRPA1-211ENST00000560433 GRIN2DO15399 1336 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 MROH7Q68CQ1 1323 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 ANKRD62A6NC57 917 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 MEIS3P2A8K0S8 358 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 EFCAB8A8MWE9 144 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 THAP12O43422 761 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 BUB1BO60566 1050 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 C2orf54Q08AI8 447 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 IRF5Q13568 498 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 TMEM132DQ14C87 1099 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 SGSM1Q2NKQ1 1148 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 NAA35Q5VZE5 725 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 SLC27A1Q6PCB7 646 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CREG2Q8IUH2 290 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 SMYD3Q9H7B4 428 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 GTF2IRD1Q9UHL9 959 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 AGAP1Q9UPQ3 857 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 NOC2LQ9Y3T9 749 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 ANO9A1A5B4 782 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CTAGE15A4D2H0 777 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 RTN2O75298 545 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 TMEM253P0C7T8 217 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CTAGE8P0CG41 777 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 BRD2P25440 801 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 ASPAP45381 313 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 SURF1Q15526 300 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 MEI1Q5TIA1 1274 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 NOTUMQ6P988 496 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 ENOSF1Q7L5Y1 443 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 DPH6Q7L8W6 267 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CTAGE6Q86UF2 777 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 SESTD1Q86VW0 696 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CTAGE4Q8IX94 777 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 LRRC57Q8N9N7 239 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 ZSWIM1Q9BR11 485 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 TRIM7Q9C029 511 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 GOLGA2P5Q9HBQ8 144 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 TRMT13Q9NUP7 481 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CACNG4Q9UBN1 327 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 PARP2Q9UGN5 583 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 HMGXB4Q9UGU5 601 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 DAAM1Q9Y4D1 1078 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 CDY2AQ9Y6F7 541 aa11.64□□□□□ -0.55
SNRPA1-211ENST00000560433 KCNK3O14649 394 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 RECQL4O94761 1208 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 IL18RAPO95256 599 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 GJB6O95452 261 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 WHAMMP3Q1A5X7 153 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 DAB2IPQ5VWQ8 1189 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 FBXO38Q6PIJ6 1188 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 FAM228AQ86W67 206 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 FMNL3Q8IVF7 1028 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 CEP112Q8N8E3 955 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 CXorf38Q8TB03 319 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 RFFLQ8WZ73 363 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 ANKRD7Q92527 254 aa11.63□□□□□ -0.55
SNRPA1-211ENST00000560433 ZNF653Q96CK0 615 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms