RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 PCMTD1Q96MG8 357 aaPredicted RBP14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 SLC9A7Q96T83 725 aa14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 NUP58Q9BVL2 599 aa14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 GANQ9H2C0 597 aa14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 MTIF3Q9H2K0 278 aaKnown RBP14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 FBXL5Q9UKA1 691 aa14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 DAAM1Q9Y4D1 1078 aa14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.69□□□□□ -0.063e-11■□□□□ 9.1
HMBOX1-213ENST00000560269 TNRC18O15417 2968 aaPredicted RBP14.69□□□□□ -0.06
HMBOX1-213ENST00000560269 PPEF2O14830 753 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 EPHB6O15197 1021 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 B4GALT3O60512 393 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 PNPLA4P41247 253 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 HTRA4P83105 476 aaPredicted RBP14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 TBX2Q13207 712 aaPredicted RBP14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 TRIM14Q14142 442 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 UPP1Q16831 310 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 WDR44Q5JSH3 913 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 PHLDB3Q6NSJ2 640 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 TMC6Q7Z403 805 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 ZNF280BQ86YH2 543 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 COLGALT2Q8IYK4 626 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 LRRC43Q8N309 656 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 CCDC150Q8NCX0 1101 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 FAXDC2Q96IV6 333 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 ZNF560Q96MR9 790 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 NT5C1BQ96P26 610 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 GDF15Q99988 308 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 PI4K2AQ9BTU6 479 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 EDEM3Q9BZQ6 932 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 IMPG2Q9BZV3 1241 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 TTYH3Q9C0H2 523 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 APOBEC3GQ9HC16 384 aaKnown RBP14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 FAM207AQ9NSI2 230 aaPredicted RBP14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 APEX2Q9UBZ4 518 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 R3HCC1Q9Y3T6 440 aaKnown RBP14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 SCN1AP35498 2009 aa14.68□□□□□ -0.06
HMBOX1-213ENST00000560269 A0A1W2PQJ5 194 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 CASTOR2A6NHX0 329 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 PODXLO00592 558 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 GJB5O95377 273 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 UCHL3P15374 230 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 TRIM21P19474 475 aaKnown RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 RFX1P22670 979 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 PAX3P23760 479 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 CLCNKBP51801 687 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 NOP14P78316 857 aaKnown RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 APBA1Q02410 837 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 RNASELQ05823 741 aaKnown RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 MYO1EQ12965 1108 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 ZNF699Q32M78 642 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 SPOPLQ6IQ16 392 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 TMCO2Q7Z6W1 182 aaPredicted RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 ARHGEF19Q8IW93 802 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 CMTR2Q8IYT2 770 aaKnown RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 TATDN2Q93075 761 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 HPDLQ96IR7 371 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 PDLIM2Q96JY6 352 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 FAM81BQ96LP2 452 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 FAM193BQ96PV7 902 aaPredicted RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 TMEM175Q9BSA9 504 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 NAA15Q9BXJ9 866 aaKnown RBP14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 NRDE2Q9H7Z3 1164 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 CEP72Q9P209 647 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 NUB1Q9Y5A7 615 aa14.67□□□□□ -0.06
HMBOX1-213ENST00000560269 TMEM189-UBE2V1I3L0A0 370 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 GYPCP04921 128 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 TAF6P49848 677 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 LILRA4P59901 499 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 GCNT1Q02742 428 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 LRMPQ12912 555 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 SV2CQ496J9 727 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 ZNF667Q5HYK9 610 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 C9orf50Q5SZB4 431 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 FAM117BQ6P1L5 589 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 DCLRE1AQ6PJP8 1040 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 HERC6Q8IVU3 1022 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 C3orf58Q8NDZ4 430 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 PAAF1Q9BRP4 392 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 CWH43Q9H720 699 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 IMPACTQ9P2X3 320 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 CACNG4Q9UBN1 327 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 DNAJB4Q9UDY4 337 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 CAPN11Q9UMQ6 739 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
HMBOX1-213ENST00000560269 KPNA7A9QM74 516 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 H0YGN5 161 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 SPTLC1O15269 473 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 POLR2FP61218 127 aaKnown RBP14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 SHHQ15465 462 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 PAN2Q504Q3 1202 aaKnown RBP14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 SMYD5Q6GMV2 418 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 IQCEQ6IPM2 695 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 GJB7Q6PEY0 223 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 CD300LGQ6UXG3 332 aa14.65□□□□□ -0.06
HMBOX1-213ENST00000560269 ENOSF1Q7L5Y1 443 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms