RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 DMTF1Q9Y222 760 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 TACC3Q9Y6A5 838 aa20.26■□□□□ 0.83
SEMA4B-215ENST00000560089 F8W8V4 182 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 SMIM18P0DKX4 95 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 CETN2P41208 172 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 LRRC36Q1X8D7 754 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 ANKRD35Q8N283 1001 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 ZFP28Q8NHY6 868 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 DOLKQ9UPQ8 538 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 ARHGAP10A1A4S6 786 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 TXNDC9O14530 226 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 PHF2O75151 1096 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 TRMUO75648 421 aaKnown RBP20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 HMGB2P26583 209 aaKnown RBP20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 C6orf183Q5T699 404 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 PLEKHO2Q8TD55 490 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 ART4Q93070 314 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 VPS50Q96JG6 964 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 PPP1R10Q96QC0 940 aaKnown RBP20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 BHMT2Q9H2M3 363 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 ZDHHC7Q9NXF8 308 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 DIS3Q9Y2L1 958 aaKnown RBP20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 TRIM17Q9Y577 477 aa20.25■□□□□ 0.83
SEMA4B-215ENST00000560089 MECOMQ03112 1051 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 FYB2Q5VWT5 728 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 PASD1Q8IV76 773 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 C4orf32Q8N8J7 132 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 LRRC27Q9C0I9 530 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 TRPC7Q9HCX4 862 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 TFAP2AP05549 437 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 VCLP18206 1134 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 S100A1P23297 94 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 SPARCL1Q14515 664 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 MMEL1Q495T6 779 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 C6orf163Q5TEZ5 329 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 LRRC6Q86X45 466 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 ALDH16A1Q8IZ83 802 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 SREK1Q8WXA9 508 aaKnown RBP20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 OSBPL10Q9BXB5 764 aa20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
SEMA4B-215ENST00000560089 DDX3YO15523 660 aaKnown RBP20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 ADAM23O75077 832 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 SPAG7O75391 227 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 H2AFZP0C0S5 128 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 ESRRAP11474 423 aaPredicted RBP20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 NPR1P16066 1061 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 CHRNA3P32297 505 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 NEPROQ6NW34 567 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 H2AFVQ71UI9 128 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 SFR1Q86XK3 245 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 C7orf43Q8WVR3 580 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 DCTN4Q9UJW0 460 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 ANKRD63C9JTQ0 380 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 BUD23O43709 281 aaKnown RBP20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 PLCG1P19174 1290 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 RCAN1P53805 252 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 HEPHQ9BQS7 1158 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 GRIP2Q9C0E4 1043 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 RBM38Q9H0Z9 239 aaKnown RBP20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 DNAJB4Q9UDY4 337 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 PPM1HQ9ULR3 514 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 NAALADL1Q9UQQ1 740 aa20.23■□□□□ 0.83
SEMA4B-215ENST00000560089 RASA4BC9J798 803 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 RASA4O43374 803 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 ZBTB7AO95365 584 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 MUTP22033 750 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 DLG1Q12959 904 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 DOK7Q18PE1 504 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 SFT2D3Q587I9 215 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CCDC62Q6P9F0 684 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 PACS1Q6VY07 963 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 LRRC55Q6ZSA7 311 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 OTOAQ7RTW8 1153 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 METTL25Q8N6Q8 603 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 SH3RF3Q8TEJ3 882 aaPredicted RBP20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 C7orf25Q9BPX7 421 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CACNA1SQ13698 1873 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 C15orf38-AP3S2A0A0A6YYH1 394 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CIB2O75838 187 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 SLC5A2P31639 672 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CALCOCO2Q13137 446 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 ZNF568Q3ZCX4 644 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 TMEM214Q6NUQ4 689 aaKnown RBP20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 RIPOR1Q6ZS17 1223 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 ARPINQ7Z6K5 226 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 C14orf80Q86SX3 495 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CCSER1Q9C0I3 900 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 COL11A2P13942 1736 aaPredicted RBP20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 GSG1L2A8MUP6 293 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 RAP1GDS1P52306 607 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 PFKPQ01813 784 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 EVX2Q03828 476 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 CAMK2BQ13554 666 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 PDK4Q16654 411 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 MYLK3Q32MK0 819 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 COBLL1Q53SF7 1204 aa20.22■□□□□ 0.83
SEMA4B-215ENST00000560089 UGT2A3Q6UWM9 527 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms