RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ZNF862O60290 1169 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 EIF3EP60228 445 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ST8SIA6P61647 398 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF57Q68EA5 555 aaPredicted RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 CC2D1AQ6P1N0 951 aaPredicted RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 UBASH3BQ8TF42 649 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 C18orf25Q96B23 403 aaPredicted RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ATAD3AQ9NVI7 634 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ANO9A1A5B4 782 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 LGALS3BPQ08380 585 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 EDRF1Q3B7T1 1238 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 RC3H1Q5TC82 1133 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 IFNEQ86WN2 208 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 SAMSN1Q9NSI8 373 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ADAMTS1Q9UHI8 967 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ADGRL1O94910 1474 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 PRR23AA6NEV1 266 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TAF4O00268 1085 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 GUCY1B2O75343 617 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 PEX3P56589 373 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 UBXN2AP68543 259 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 KYAT1Q16773 422 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TMEM270Q6UE05 265 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 MACC1Q6ZN28 852 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 CACTIN-AS1Q8N1I8 211 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 RERGLQ9H628 205 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ATP6V1HQ9UI12 483 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 ACTR2P61160 394 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 KBTBD12Q3ZCT8 623 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 C11orf57Q6ZUT1 292 aaPredicted RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 BNIPLQ7Z465 357 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 OOSP2Q86WS3 158 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TSPYL6Q8N831 410 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 DHX35Q9H5Z1 703 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 CATSPER4Q7RTX7 472 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 RMND5AQ9H871 391 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 SRGAP2O75044 1071 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 MDH1P40925 334 aaKnown RBP14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 TRPM8Q7Z2W7 1104 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 C11orf96Q7Z7L8 435 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 SPON2Q9BUD6 331 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 IL1RL2Q9HB29 575 aa14.49□□□□□ -0.09
CSPG4P12-202ENST00000559989 SARSP49591 514 aaKnown RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ERAP2Q6P179 960 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 NSL1Q96IY1 281 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 CEP44Q9C0F1 390 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 PSMC3IPQ9P2W1 217 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 C3orf70A6NLC5 250 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ALOX15P16050 662 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARHGEF7Q14155 803 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 DDR2Q16832 855 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 EPHX4Q8IUS5 362 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 RNF25Q96BH1 459 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 PAGE5Q96GU1 130 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 KANSL1LA0AUZ9 987 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 MED26O95402 600 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ACADLP28330 430 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 TPI1P60174 286 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 TIGD7Q6NT04 549 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ENOSF1Q7L5Y1 443 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 BLMP54132 1417 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 MEI4A8MW99 385 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 YWHAQP27348 245 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 FNTAP49354 379 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 TSNQ15631 228 aaKnown RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 P3H1Q32P28 736 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 SUPT20HL1Q3ZLR7 823 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 MFSD4BQ5TF39 518 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 KRT35Q92764 455 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 C14orf93Q9H972 538 aaKnown RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 COMMD9Q9P000 198 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF624Q9P2J8 865 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 NDUFB9Q9Y6M9 179 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 BTN3A3O00478 584 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 MMP1P03956 469 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ITGA1P56199 1179 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 DGKKQ5KSL6 1271 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 COMMD2Q86X83 199 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 CYFIP2Q96F07 1278 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 MAML3Q96JK9 1138 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 POLG2Q9UHN1 485 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF24P17028 368 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 CDK17Q00537 523 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 GFPT1Q06210 699 aaPredicted RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 TCEAL5Q5H9L2 206 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 EIF3LQ9Y262 564 aaKnown RBP14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 V9GYQ6 96 aa14.48□□□□□ -0.09
CSPG4P12-202ENST00000559989 PCF11O94913 1555 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 FGFR4P22455 802 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 NPEPPSP55786 919 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 ZNF200P98182 395 aaPredicted RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 CYP27A1Q02318 531 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 CACHD1Q5VU97 1274 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 PID1Q7Z2X4 250 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 GSPT2Q8IYD1 628 aaKnown RBP14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 FAM167AQ96KS9 214 aa14.47□□□□□ -0.09
CSPG4P12-202ENST00000559989 ARMC7Q9H6L4 198 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms