RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 B4GALT3O60512 393 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 CST3P01034 146 aaPredicted RBP15.46■□□□□ 0.07
SMAD6-204ENST00000559931 GALTP07902 379 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 LRPAP1P30533 357 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 PBX3P40426 434 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 PIK3CAP42336 1068 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 COPB1P53618 953 aaKnown RBP15.46■□□□□ 0.07
SMAD6-204ENST00000559931 MYL7Q01449 175 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 MYO1EQ12965 1108 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 NCOA4Q13772 614 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 UPP1Q16831 310 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 ZACNQ401N2 412 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 FKBP15Q5T1M5 1219 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 COLGALT1Q8NBJ5 622 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 PAAF1Q9BRP4 392 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 SLC28A3Q9HAS3 691 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.46■□□□□ 0.073e-6■■■■■ 130.4
SMAD6-204ENST00000559931 MTUS1Q9ULD2 1270 aa15.46■□□□□ 0.07
SMAD6-204ENST00000559931 YBX2Q9Y2T7 364 aaKnown RBP15.46■□□□□ 0.07
SMAD6-204ENST00000559931 CARNS1A5YM72 827 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 HLA-DRAP01903 254 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 CTNNB1P35222 781 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 MCCD1P59942 119 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-204ENST00000559931 SMAD3P84022 425 aaKnown RBP15.45■□□□□ 0.06
SMAD6-204ENST00000559931 FANCCQ00597 558 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 CBWD6Q4V339 395 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 WDR44Q5JSH3 913 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 CBWD3Q5JTY5 395 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 CBWD5Q5RIA9 395 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 PPP2R2DQ66LE6 453 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 FBXL13Q8NEE6 735 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 HASPINQ8TF76 798 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 HPDLQ96IR7 371 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 IMPG2Q9BZV3 1241 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 SPG21Q9NZD8 308 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 RWDD3Q9Y3V2 267 aa15.45■□□□□ 0.06
SMAD6-204ENST00000559931 SCN1AP35498 2009 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 ANO9A1A5B4 782 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 PIRO00625 290 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 PPEF2O14830 753 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 VNN1O95497 513 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 BMPR1AP36894 532 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 PNPLA4P41247 253 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 TAF6P49848 677 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 FXR1P51114 621 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMAD6-204ENST00000559931 MYL6P60660 151 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 UBXN1Q04323 297 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 KRT17Q04695 432 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 SGSM1Q2NKQ1 1148 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 MIIPQ5JXC2 388 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 DSTYKQ6XUX3 929 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 GBP6Q6ZN66 633 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 C15orf39Q6ZRI6 1047 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 TAS1R2Q8TE23 839 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 TMEM169Q96HH4 297 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 PCMTD1Q96MG8 357 aaPredicted RBP15.44■□□□□ 0.06
SMAD6-204ENST00000559931 ZNF560Q96MR9 790 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
SMAD6-204ENST00000559931 CRACR2AQ9BSW2 395 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 RAB20Q9NX57 234 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 SIX4Q9UIU6 781 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 COL4A6Q14031 1691 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 NLRC5Q86WI3 1866 aa15.44■□□□□ 0.06
SMAD6-204ENST00000559931 LRRC10BA6NIK2 292 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 F8W810 466 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 P4HA2O15460 535 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 TRAPPC3O43617 180 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 KIF4AO95239 1232 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 DNAJB2P25686 324 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 ATICP31939 592 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 PPM1AP35813 382 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 UBASH3AP57075 661 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 LILRA4P59901 499 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 TAP1Q03518 808 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 ZNF699Q32M78 642 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 SV2CQ496J9 727 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 SCARA3Q6AZY7 606 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 LRRC52Q8N7C0 313 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 CLP1Q92989 425 aaKnown RBP15.43■□□□□ 0.06
SMAD6-204ENST00000559931 TIFAQ96CG3 184 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 C17orf80Q9BSJ5 609 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 PI4K2AQ9BTU6 479 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 CERS4Q9HA82 394 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 NXF1Q9UBU9 619 aaKnown RBP15.43■□□□□ 0.06
SMAD6-204ENST00000559931 ADAM28Q9UKQ2 775 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 KIAA1671Q9BY89 1806 aa15.43■□□□□ 0.06
SMAD6-204ENST00000559931 LGALS16A8MUM7 142 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 KPNA7A9QM74 516 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 I3L4J1 428 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 ITGB1P05556 798 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 TPM3P06753 285 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 IGFBP6P24592 240 aaPredicted RBP15.42■□□□□ 0.06
SMAD6-204ENST00000559931 BRCC3P46736 316 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 TNNC1P63316 161 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 LRMPQ12912 555 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 EXOC3L4Q17RC7 722 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 EPC2Q52LR7 807 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 ZNF667Q5HYK9 610 aa15.42■□□□□ 0.06
SMAD6-204ENST00000559931 SLC39A11Q8N1S5 342 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms