RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ZNF558Q96NG5 402 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 GUCD1Q96NT3 240 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 TSPAN18Q96SJ8 248 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 GPR62Q9BZJ7 368 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 MTMR12Q9C0I1 747 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 DNAJC25Q9H1X3 360 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 ALG13Q9NP73 1137 aaKnown RBP9.79□□□□□ -0.84
HMG20A-209ENST00000559728 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 UBQLN1Q9UMX0 589 aaKnown RBP9.79□□□□□ -0.84
HMG20A-209ENST00000559728 FAN1Q9Y2M0 1017 aa9.79□□□□□ -0.84
HMG20A-209ENST00000559728 PRG3Q9Y2Y8 225 aaPredicted RBP9.79□□□□□ -0.84
HMG20A-209ENST00000559728 FNDC1Q4ZHG4 1894 aaPredicted RBP9.79□□□□□ -0.84
HMG20A-209ENST00000559728 BICDL2A1A5D9 508 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 FSCN2O14926 492 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 LRRN2O75325 713 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 ALDH2P05091 517 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 TRIM49P0CI25 452 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 TRIM49CP0CI26 452 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 RPL13P26373 211 aaKnown RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 IRS1P35568 1242 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 BRCC3P46736 316 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 VAMP7P51809 220 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 ERVFC1P60507 584 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 BFSP1Q12934 665 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 HSP90AA2PQ14568 343 aaPredicted RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 ZACNQ401N2 412 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 ANO6Q4KMQ2 910 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 CDKAL1Q5VV42 579 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 TDRD10Q5VZ19 366 aaKnown RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 C9orf57Q5W0N0 161 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 DCLRE1AQ6PJP8 1040 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SASS6Q6UVJ0 657 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 NT5DC4Q86YG4 428 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 TRIM59Q8IWR1 403 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 ENOX1Q8TC92 643 aaKnown RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SLC35C1Q96A29 364 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SYAP1Q96A49 352 aaPredicted RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SAMD11Q96NU1 681 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 HS3ST6Q96QI5 342 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 TSG101Q99816 390 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SRRTQ9BXP5 876 aaKnown RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 PRDM12Q9H4Q4 367 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SAMSN1Q9NSI8 373 aaKnown RBP9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SLC38A7Q9NVC3 462 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 ANO10Q9NW15 660 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 DPP3Q9NY33 737 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 SPG21Q9NZD8 308 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 FRMD4BQ9Y2L6 1034 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 PCDHGC5Q9Y5F6 944 aa9.78□□□□□ -0.84
HMG20A-209ENST00000559728 IKBKBO14920 756 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 LILRB3O75022 631 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 B3GAT3O94766 335 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 ITGB3P05106 788 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 DLATP10515 647 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 RPL9P32969 192 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 ALDH7A1P49419 539 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 TFAMQ00059 246 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 GPM6BQ13491 265 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 IQCB1Q15051 598 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 SURF1Q15526 300 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 CBWD6Q4V339 395 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 TIGD5Q53EQ6 642 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 CBWD3Q5JTY5 395 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 CBWD5Q5RIA9 395 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 INTS8Q75QN2 995 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 APTXQ7Z2E3 356 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 TRAPPC11Q7Z392 1133 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 LIMS2Q7Z4I7 341 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 FRMD5Q7Z6J6 570 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 DHX40Q8IX18 779 aaKnown RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 BEST2Q8NFU1 509 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 POF1BQ8WVV4 589 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 B3GALT6Q96L58 329 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 UROC1Q96N76 676 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 FAM193BQ96PV7 902 aaPredicted RBP9.77□□□□□ -0.85
HMG20A-209ENST00000559728 BPIFA3Q9BQP9 254 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 XYLT2Q9H1B5 865 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 CHST7Q9NS84 486 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 ADAM28Q9UKQ2 775 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 LZTS1Q9Y250 596 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 RWDD3Q9Y3V2 267 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 PCDHB12Q9Y5F1 795 aa9.77□□□□□ -0.85
HMG20A-209ENST00000559728 TRANK1O15050 2925 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 SPTBN5Q9NRC6 3674 aaKnown RBP9.76□□□□□ -0.85
HMG20A-209ENST00000559728 I3L4J1 428 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 M0QZQ0 153 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 LETM1O95202 739 aaPredicted RBP9.76□□□□□ -0.85
HMG20A-209ENST00000559728 EPB41P11171 864 aaKnown RBP9.76□□□□□ -0.85
HMG20A-209ENST00000559728 ZNF18P17022 549 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 POU3F3P20264 500 aaPredicted RBP9.76□□□□□ -0.85
HMG20A-209ENST00000559728 POLR2BP30876 1174 aaKnown RBP9.76□□□□□ -0.85
HMG20A-209ENST00000559728 PPM1AP35813 382 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 GCLMP48507 274 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 LILRA4P59901 499 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 DUOXA2Q1HG44 320 aa9.76□□□□□ -0.85
HMG20A-209ENST00000559728 RTP2Q5QGT7 225 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms