RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 FAM102AQ5T9C2 384 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 TNFRSF25Q93038 417 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PPP2R3CQ969Q6 453 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 NT5C1AQ9BXI3 368 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 SLC24A3Q9HC58 644 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 ZNF446Q9NWS9 450 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PPME1Q9Y570 386 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 POMCP01189 267 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 CALB1P05937 261 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 GJB1P08034 283 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PCSK1P29120 753 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 SDC4P31431 198 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 EPC2Q52LR7 807 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PDXDC1Q6P996 788 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PLPPR4Q7Z2D5 763 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 RNF10Q8N5U6 811 aaKnown RBP11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 HASPINQ8TF76 798 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 ARHGEF2Q92974 986 aaKnown RBP11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 NIF3L1Q9GZT8 377 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 PCSK1NQ9UHG2 260 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 TUBGCP6Q96RT7 1819 aa11.3□□□□□ -0.6
CARMIL3-202ENST00000559694 LCP1P13796 627 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 ADCY8P40145 1251 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 KRT17Q04695 432 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 CACNB2Q08289 660 aaPredicted RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 KCNA1Q09470 495 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 CCL14Q16627 93 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 ARL13BQ3SXY8 428 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 SLC30A5Q8TAD4 765 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 ADAM2Q99965 735 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 PRRG1O14668 218 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 EVI5O60447 810 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 HOXC6P09630 235 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 SPATA31C1P0DKV0 1188 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 RWDD4Q6NW29 188 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 GJB7Q6PEY0 223 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 ANO5Q75V66 913 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 CHP1Q99653 195 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 RNF19AQ9NV58 838 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 STRIP2Q9ULQ0 834 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 TRPV2Q9Y5S1 764 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 TJP1Q07157 1748 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 NR1I3Q14994 352 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 RAD9BQ6WBX8 426 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 NOA1Q8NC60 698 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 ASAP3Q8TDY4 903 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 GPR20Q99678 358 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 COLEC11Q9BWP8 271 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 VCXQ9H320 206 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 INTS9Q9NV88 658 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 NOVA2Q9UNW9 492 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 SNED1Q8TER0 1413 aa11.29□□□□□ -0.6
CARMIL3-202ENST00000559694 H3BQF6 201 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 BNIP3LO60238 219 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 DUSP11O75319 330 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 KLK7P49862 253 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SNX1Q13596 522 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 BEND6Q5SZJ8 279 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 HSPH1Q92598 858 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SMC6Q96SB8 1091 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 AGPAT1Q99943 283 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 CDY2AQ9Y6F7 541 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 CASTOR2A6NHX0 329 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 DPYSL4O14531 572 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 MOCS2O96007 188 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ATP1A1P05023 1023 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ASGR1P07306 291 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 GLRA2P23416 452 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ZNF131P52739 623 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SLC27A1Q6PCB7 646 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ABHD15Q6UXT9 468 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ZNF410Q86VK4 478 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 RYBPQ8N488 228 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ZNF507Q8TCN5 953 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 HNRNPLLQ8WVV9 542 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 MTMR8Q96EF0 704 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 KLHL14Q9P2G3 628 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 STAP1Q9ULZ2 295 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 TOGARAM1Q9Y4F4 1720 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 CCDC85CA6NKD9 419 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 TISP43B9A030 160 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 STX2P32856 288 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 PMS1P54277 932 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 RBBP5Q15291 538 aaKnown RBP11.28□□□□□ -0.6
CARMIL3-202ENST00000559694 LDLRAD1Q5T700 205 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms