RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, human

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSEN1-224	ENST00000559361	ANHX	E9PGG2	379 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	ACKR2	O00590	384 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	RFPL2	O75678	378 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	PRKCB	P05771	671 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	DCN	P07585	359 aa	Known RBP	18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	LAMP2	P13473	410 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	HOXA11	P31270	313 aa	Predicted RBP	18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	SNRPF	P62306	86 aa	Known RBP	18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	BMT2	Q1RMZ1	405 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	UBXN11	Q5T124	520 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	SUMF1	Q8NBK3	374 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	GPR152	Q8TDT2	470 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	MRPL4	Q9BYD3	311 aa	Known RBP	18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	SLC2A4RG	Q9NR83	387 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	TMEM63C	Q9P1W3	806 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	TBX20	Q9UMR3	447 aa		18.31	■□□□□ 0.52
PSEN1-224	ENST00000559361	MIA3	Q5JRA6	1907 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	C2CD2L	O14523	706 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	GLUD1	P00367	558 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	UROD	P06132	367 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	GLUL	P15104	373 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	NMT1	P30419	496 aa	Known RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	STIM1	Q13586	685 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	MORC3	Q14149	939 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	L1TD1	Q5T7N2	865 aa	Known RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	ZPBP2	Q6X784	338 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	COLGALT2	Q8IYK4	626 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	MAML2	Q8IZL2	1156 aa	Predicted RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	GUF1	Q8N442	669 aa	Known RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	SMG7	Q92540	1137 aa	Known RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	FAM193B	Q96PV7	902 aa	Predicted RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	ACCS	Q96QU6	501 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	KIFC3	Q9BVG8	833 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	ARHGEF3	Q9NR81	526 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	CHST7	Q9NS84	486 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	CGN	Q9P2M7	1197 aa	Known RBP	18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	MAN1B1	Q9UKM7	699 aa		18.3	■□□□□ 0.52
PSEN1-224	ENST00000559361	POMC	P01189	267 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	PIGR	P01833	764 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	STARD6	P59095	220 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	DSG1	Q02413	1049 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	DSC1	Q08554	894 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	STK4	Q13043	487 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	PRPF4B	Q13523	1007 aa	Known RBP	18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	HTR4	Q13639	388 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	HSP90AA2P	Q14568	343 aa	Predicted RBP	18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	ELMSAN1	Q6PJG2	1045 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	DCLK2	Q8N568	766 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	KIAA0895	Q8NCT3	520 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	GOLGA5	Q8TBA6	731 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	ZNF507	Q8TCN5	953 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	PLEKHA4	Q9H4M7	779 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	MINDY3	Q9H8M7	445 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	SLC39A2	Q9NP94	309 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	TBC1D7	Q9P0N9	293 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	DACH1	Q9UI36	760 aa		18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	TDRD15	B5MCY1	1934 aa	Known RBP	18.29	■□□□□ 0.52
PSEN1-224	ENST00000559361	MAP1B	P46821	2468 aa	Known RBP	18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	CHD8	Q9HCK8	2581 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	RFX1	P22670	979 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	GLUD2	P49448	558 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	AMHR2	Q16671	573 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	NOTUM	Q6P988	496 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	LILRA6	Q6PI73	481 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	DCLRE1A	Q6PJP8	1040 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	SASS6	Q6UVJ0	657 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	GPR65	Q8IYL9	337 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	MLKL	Q8NB16	471 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	SMG8	Q8ND04	991 aa	Known RBP	18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	PJA1	Q8NG27	643 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	SCFD1	Q8WVM8	642 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	ERCC4	Q92889	916 aa	Predicted RBP	18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	BORCS6	Q96GS4	357 aa		18.28	■□□□□ 0.52
PSEN1-224	ENST00000559361	F5	P12259	2224 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	HNRNPDL	O14979	420 aa	Known RBP	18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	N4BP3	O15049	544 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	TSPAN1	O60635	241 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	TOM1L1	O75674	476 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	MYB	P10242	640 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	CASP5	P51878	434 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	KNOP1	Q1ED39	458 aa	Known RBP	18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	FOXR2	Q6PJQ5	311 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	HS2ST1	Q7LGA3	356 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	TAS1R3	Q7RTX0	852 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	SYCP3	Q8IZU3	236 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	HPS3	Q969F9	1004 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	BICD1	Q96G01	975 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	ADPGK	Q9BRR6	497 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	PRKD2	Q9BZL6	878 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	UBN1	Q9NPG3	1134 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	ZDHHC7	Q9NXF8	308 aa		18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361	PRG3	Q9Y2Y8	225 aa	Predicted RBP	18.27	■□□□□ 0.52
PSEN1-224	ENST00000559361		A0A1B0GUA9	196 aa		18.26	■□□□□ 0.51
PSEN1-224	ENST00000559361	PSMA7	O14818	248 aa		18.26	■□□□□ 0.51
PSEN1-224	ENST00000559361	KIAA0391	O15091	583 aa	Known RBP	18.26	■□□□□ 0.51
PSEN1-224	ENST00000559361	SPATA31D3	P0C874	917 aa		18.26	■□□□□ 0.51

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