RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 PBX2P40425 430 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 COPB1P53618 953 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 BCAR1P56945 870 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 TFAMQ00059 246 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 TAP1Q03518 808 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 RAB30Q15771 203 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 VWA3BQ502W6 1294 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 PAN2Q504Q3 1202 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 HSP90AA4PQ58FG1 418 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 DCLRE1AQ6PJP8 1040 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 TMEM173Q86WV6 379 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 SLC39A11Q8N1S5 342 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 FIBCD1Q8N539 461 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 COLGALT1Q8NBJ5 622 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 TAS1R2Q8TE23 839 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 BCL7CQ8WUZ0 217 aaPredicted RBP15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 ZBED2Q9BTP6 218 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 NDST4Q9H3R1 872 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 CDH23Q9H251 3354 aa15.98■□□□□ 0.15
SNRPA1-207ENST00000559309 PLXNA4Q9HCM2 1894 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 EYSQ5T1H1 3165 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 F8W810 466 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 PODXLO00592 558 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 SPTLC1O15269 473 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 ASS1P00966 412 aaKnown RBP15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 TNNC2P02585 160 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 ITGB3P05106 788 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 ITGB1P05556 798 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 CA3P07451 260 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 LAG3P18627 525 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 MXI1P50539 228 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 ERVK-21P61565 698 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 KCNT2Q6UVM3 1135 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 FBXL13Q8NEE6 735 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 SEMA4DQ92854 862 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 FAXDC2Q96IV6 333 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 GUCD1Q96NT3 240 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 PLVAPQ9BX97 442 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 VN1R3Q9BXE9 311 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 RTN4Q9NQC3 1192 aaKnown RBP15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 GDAP2Q9NXN4 497 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 CACNG4Q9UBN1 327 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 VWA8A3KMH1 1905 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 PRUNE2Q8WUY3 3088 aa15.97■□□□□ 0.15
SNRPA1-207ENST00000559309 TRANK1O15050 2925 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 CASTOR2A6NHX0 329 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 LGALS16A8MUM7 142 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 M0QZQ0 153 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 AP5Z1O43299 807 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 N4BP1O75113 896 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 LRRN2O75325 713 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 KIF4AO95239 1232 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 HLA-DRAP01903 254 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 ALDH2P05091 517 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 POLR2BP30876 1174 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 ATICP31939 592 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 BMPR1AP36894 532 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 PBX1P40424 430 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 MTIF2P46199 727 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 LILRA4P59901 499 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 RBP5P82980 135 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 PLCB3Q01970 1234 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 KCNMA1Q12791 1236 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 NR1I3Q14994 352 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 DCAF17Q5H9S7 520 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 SMYD5Q6GMV2 418 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 SARM1Q6SZW1 724 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 SPRED2Q7Z698 418 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 RNF214Q8ND24 703 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 TAF4BQ92750 862 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 IGSF21Q96ID5 467 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 NAP1L5Q96NT1 182 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 SAMD11Q96NU1 681 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 ERGIC2Q96RQ1 377 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 MAGEC2Q9UBF1 373 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 RWDD3Q9Y3V2 267 aa15.96■□□□□ 0.15
SNRPA1-207ENST00000559309 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 ZC3H11AO75152 810 aaKnown RBP eCLIP15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 RB1P06400 928 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 PNPLA4P41247 253 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 RNASELQ05823 741 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 NCOA4Q13772 614 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 TCERG1LQ5VWI1 586 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 EHBP1Q8NDI1 1231 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 ZNF558Q96NG5 402 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 RAB20Q9NX57 234 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 TAB2Q9NYJ8 693 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 ADAM28Q9UKQ2 775 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 AGAP1Q9UPQ3 857 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 FAN1Q9Y2M0 1017 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 ATG2AQ2TAZ0 1938 aa15.95■□□□□ 0.14
SNRPA1-207ENST00000559309 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 FAM163BP0C2L3 166 aa15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 DNAJB2P25686 324 aa15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 PBX3P40426 434 aa15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 ALDH7A1P49419 539 aaKnown RBP15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 MYL6P60660 151 aa15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 FANCCQ00597 558 aa15.94■□□□□ 0.14
SNRPA1-207ENST00000559309 MYL7Q01449 175 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms