RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 PLEKHO2Q8TD55 490 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 RIN2Q8WYP3 895 aaPredicted RBP17.54■□□□□ 0.4
PBX1-215ENST00000559240 B4GALT4O60513 344 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 IL18RAPO95256 599 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 MYBL1P10243 752 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 GRM5P41594 1212 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 FMO5P49326 533 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 EEF1DP3Q658K8 133 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 C15orf39Q6ZRI6 1047 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 SPATA21Q7Z572 469 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 KIF4AO95239 1232 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 CLTAP09496 248 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 MAGEA10P43363 369 aaPredicted RBP17.54■□□□□ 0.4
PBX1-215ENST00000559240 DPY19L2P1Q6NXN4 242 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 TLDC1Q6P9B6 456 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 CATSPER4Q7RTX7 472 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 CD302Q8IX05 232 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 ZSWIM2Q8NEG5 633 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 VTI1AQ96AJ9 217 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 ADPGKQ9BRR6 497 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 FAM213AQ9BRX8 229 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 TRMT13Q9NUP7 481 aaKnown RBP17.54■□□□□ 0.4
PBX1-215ENST00000559240 L1RE1Q9UN81 338 aa17.54■□□□□ 0.4
PBX1-215ENST00000559240 PDCD11Q14690 1871 aaKnown RBP17.53■□□□□ 0.4
PBX1-215ENST00000559240 RTN3O95197 1032 aaPredicted RBP17.53■□□□□ 0.4
PBX1-215ENST00000559240 EZRP15311 586 aaKnown RBP17.53■□□□□ 0.4
PBX1-215ENST00000559240 SCNN1BP51168 640 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 TMC6Q7Z403 805 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 FAM228AQ86W67 206 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 CCDC150Q8NCX0 1101 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 PPP1R13LQ8WUF5 828 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 PLEKHG4BQ96PX9 1271 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 WDR24Q96S15 920 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 CGRRF1Q99675 332 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 ANKFY1Q9P2R3 1169 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 PITPNM1O00562 1244 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 KCNMA1Q12791 1236 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 FBXO47Q5MNV8 452 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 NT5DC4Q86YG4 428 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 TMEM8AQ9HCN3 771 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 ERVK-5Q9HDB9 667 aa17.53■□□□□ 0.4
PBX1-215ENST00000559240 PUF60Q9UHX1 559 aaKnown RBP17.53■□□□□ 0.4
PBX1-215ENST00000559240 LRRIQ3A6PVS8 624 aaPredicted RBP17.52■□□□□ 0.4
PBX1-215ENST00000559240 GPR182O15218 404 aa17.52■□□□□ 0.4
PBX1-215ENST00000559240 ZSCAN9O15535 394 aaPredicted RBP17.52■□□□□ 0.4
PBX1-215ENST00000559240 FECHP22830 423 aa17.52■□□□□ 0.4
PBX1-215ENST00000559240 PLEKHA5Q9HAU0 1116 aa17.52■□□□□ 0.4
PBX1-215ENST00000559240 RBAKQ9NYW8 714 aaPredicted RBP17.52■□□□□ 0.4
PBX1-215ENST00000559240 PARNO95453 639 aaKnown RBP17.52■□□□□ 0.39
PBX1-215ENST00000559240 RFX1P22670 979 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 ZBED6P86452 979 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 TMEM62Q0P6H9 643 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 SLC39A5Q6ZMH5 540 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 WDR49Q8IV35 697 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 ASB7Q9H672 318 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 NOD1Q9Y239 953 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 DERAQ9Y315 318 aa17.52■□□□□ 0.39
PBX1-215ENST00000559240 NOC2LQ9Y3T9 749 aaKnown RBP17.52■□□□□ 0.39
PBX1-215ENST00000559240 HTTP42858 3142 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 GOLGA8IPA6NC78 632 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 GOLGA8JA6NMD2 632 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 TLR3O15455 904 aaKnown RBP17.51■□□□□ 0.39
PBX1-215ENST00000559240 KIAA0754O94854 1291 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 CKBP12277 381 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 THPOP40225 353 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 EPC2Q52LR7 807 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 ZNF668Q96K58 619 aaPredicted RBP17.51■□□□□ 0.39
PBX1-215ENST00000559240 EPAS1Q99814 870 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 MYO6Q9UM54 1294 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 CAPN11Q9UMQ6 739 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 BFSP2Q13515 415 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 DCAF17Q5H9S7 520 aaPredicted RBP17.51■□□□□ 0.39
PBX1-215ENST00000559240 UBXN11Q5T124 520 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 TCHPQ9BT92 498 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 ANKZF1Q9H8Y5 726 aa17.51■□□□□ 0.39
PBX1-215ENST00000559240 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
PBX1-215ENST00000559240 RHOXF2BP0C7M4 288 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 IMPDH2P12268 514 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 GNG11P61952 73 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 DSC3Q14574 896 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 ZRSR2Q15696 482 aaKnown RBP17.5■□□□□ 0.39
PBX1-215ENST00000559240 KRT39Q6A163 491 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 CAPRIN2Q6IMN6 1127 aaKnown RBP17.5■□□□□ 0.39
PBX1-215ENST00000559240 OR8K1Q8NGG5 319 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 LMO3Q8TAP4 145 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 RHOXF2Q9BQY4 288 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 TRPV6Q9H1D0 765 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 ZC3H11AO75152 810 aaKnown RBP eCLIP17.5■□□□□ 0.39
PBX1-215ENST00000559240 GYPCP04921 128 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 MATR3P43243 847 aaKnown RBP eCLIP17.5■□□□□ 0.39
PBX1-215ENST00000559240 IRAK1P51617 712 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 DLG4P78352 724 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 PPP3CAQ08209 521 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 CETN1Q12798 172 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 XKR4Q5GH76 650 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 CNGA4Q8IV77 575 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 CPB2Q96IY4 423 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 PANX2Q96RD6 677 aa17.5■□□□□ 0.39
PBX1-215ENST00000559240 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms