RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 SPEM2Q0P670 501 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 PRSS36Q5K4E3 855 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 KRT79Q5XKE5 535 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 TPGS2Q68CL5 300 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 CD300LGQ6UXG3 332 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 USP37Q86T82 979 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 CCDC83Q8IWF9 413 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 ZSCAN18Q8TBC5 510 aaPredicted RBP13.49□□□□□ -0.25
TRPM1-210ENST00000559179 SMARCD2Q92925 531 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 C18orf25Q96B23 403 aaPredicted RBP13.49□□□□□ -0.25
TRPM1-210ENST00000559179 TBC1D32Q96NH3 1257 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 ASB16Q96NS5 453 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 FOXP1Q9H334 677 aaPredicted RBP13.49□□□□□ -0.25
TRPM1-210ENST00000559179 TMEM134Q9H6X4 195 aa13.49□□□□□ -0.25
TRPM1-210ENST00000559179 ZNF334Q9HCZ1 680 aaPredicted RBP13.49□□□□□ -0.25
TRPM1-210ENST00000559179 RBM19Q9Y4C8 960 aaKnown RBP13.49□□□□□ -0.25
TRPM1-210ENST00000559179 NOTCH4Q99466 2003 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 SFI1A8K8P3 1242 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 E9PMD0 336 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 DPYSL4O14531 572 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 SLC16A4O15374 487 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
TRPM1-210ENST00000559179 LILRB5O75023 590 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 MICAL2O94851 1124 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 CCNE1P24864 410 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 CXCL12P48061 93 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRPM1-210ENST00000559179 TEAD2Q15562 447 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 ECM1Q16610 540 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 MPZL3Q6UWV2 235 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 DSTYKQ6XUX3 929 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 GPIHBP1Q8IV16 184 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 CELF5Q8N6W0 485 aaKnown RBP13.48□□□□□ -0.25
TRPM1-210ENST00000559179 LEMD2Q8NC56 503 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 DEPDC1BQ8WUY9 529 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 DDX12PQ92771 950 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 BICD1Q96G01 975 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 ZSWIM3Q96MP5 696 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 ZMAT2Q96NC0 199 aaKnown RBP13.48□□□□□ -0.25
TRPM1-210ENST00000559179 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 RTKNQ9BST9 563 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 CNTNAP3Q9BZ76 1288 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 PRMT8Q9NR22 394 aaPredicted RBP13.48□□□□□ -0.25
TRPM1-210ENST00000559179 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 AFF4Q9UHB7 1163 aaKnown RBP13.48□□□□□ -0.25
TRPM1-210ENST00000559179 VPS13AQ96RL7 3174 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 GVINP1Q7Z2Y8 2422 aa13.48□□□□□ -0.25
TRPM1-210ENST00000559179 TULP1O00294 542 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-210ENST00000559179 KCNE1P15382 129 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 FCARP24071 287 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 ALDH1A3P47895 512 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 SMTNP53814 917 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 EPHB3P54753 998 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 YWHAHQ04917 246 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-210ENST00000559179 RAD51AP2Q09MP3 1159 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 SIM2Q14190 667 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-210ENST00000559179 LRRC32Q14392 662 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 PDIA5Q14554 519 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 NBR1Q14596 966 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 VITQ6UXI7 678 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 RNF19BQ6ZMZ0 732 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-210ENST00000559179 E2F7Q96AV8 911 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 CHAMP1Q96JM3 812 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 SUSD3Q96L08 255 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 PGLYRP2Q96PD5 576 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 GPR88Q9GZN0 384 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 CHRDQ9H2X0 955 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 KCNG1Q9UIX4 513 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 PCDHB8Q9UN66 801 aa13.47□□□□□ -0.25
TRPM1-210ENST00000559179 EP300Q09472 2414 aaPredicted RBP13.47□□□□□ -0.25
TRPM1-210ENST00000559179 HEPACAM2A8MVW5 462 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 CCR2P41597 374 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 TRAPPC10P48553 1259 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 SPAG1Q07617 926 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 PTGDRQ13258 359 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 PLD1Q13393 1074 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 FZD5Q13467 585 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 HEATR6Q6AI08 1181 aaKnown RBP13.46□□□□□ -0.25
TRPM1-210ENST00000559179 LAIR1Q6GTX8 287 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 DTHD1Q6ZMT9 781 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 CEP68Q76N32 757 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 HAUS6Q7Z4H7 955 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 MFSD6LQ8IWD5 586 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 KIF12Q96FN5 646 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 ZBTB45Q96K62 511 aaPredicted RBP13.46□□□□□ -0.25
TRPM1-210ENST00000559179 IER2Q9BTL4 223 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 CEP72Q9P209 647 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 CNTN3Q9P232 1028 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 MAFFQ9ULX9 164 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 LIMCH1Q9UPQ0 1083 aa13.46□□□□□ -0.25
TRPM1-210ENST00000559179 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.25
TRPM1-210ENST00000559179 TICRRQ7Z2Z1 1910 aa13.45□□□□□ -0.26
TRPM1-210ENST00000559179 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.45□□□□□ -0.26
TRPM1-210ENST00000559179 A0A1W2PRU2 124 aa13.45□□□□□ -0.26
TRPM1-210ENST00000559179 SLC38A8A6NNN8 435 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms