RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MAP7D2Q96T17 732 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 ADAMTS10Q9H324 1103 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 ANKZF1Q9H8Y5 726 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 TRMT13Q9NUP7 481 aaKnown RBP13.91□□□□□ -0.18
SMAD3-207ENST00000558763 CNTN6Q9UQ52 1028 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 HYOU1Q9Y4L1 999 aa13.91□□□□□ -0.18
SMAD3-207ENST00000558763 A0A0U1RQG5 324 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-207ENST00000558763 ANKRD62A6NC57 917 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 TULP1O00294 542 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-207ENST00000558763 B4GALT4O60513 344 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 TSPAN1O60635 241 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 CST3P01034 146 aaPredicted RBP13.9□□□□□ -0.18
SMAD3-207ENST00000558763 CLTAP09496 248 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 CDR2Q01850 454 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 CUL2Q13617 745 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 NCOA4Q13772 614 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 PTGISQ16647 500 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 TAF3Q5VWG9 929 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 DNAJB3Q8WWF6 145 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 RFFLQ8WZ73 363 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 CAPZA3Q96KX2 299 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 THAP2Q9H0W7 228 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 OSGEPQ9NPF4 335 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 COG5Q9UP83 839 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 NOD1Q9Y239 953 aa13.9□□□□□ -0.18
SMAD3-207ENST00000558763 FAM170AA1A519 330 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CTAGE15A4D2H0 777 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CTAGE8P0CG41 777 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CXCL8P10145 99 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 GZMAP12544 262 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 AP3M2P53677 418 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-207ENST00000558763 TCEAL1Q15170 157 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 ZNF410Q86VK4 478 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CTAGE4Q8IX94 777 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 GPR161Q8N6U8 529 aaKnown RBP13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CPB2Q96IY4 423 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 FAM81BQ96LP2 452 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 PSMB7Q99436 277 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 XYLT2Q9H1B5 865 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 PACSIN2Q9UNF0 486 aaPredicted RBP13.89□□□□□ -0.19
SMAD3-207ENST00000558763 GINS2Q9Y248 185 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 STXBP5LQ9Y2K9 1186 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 SMIM35A0A1B0GVV1 85 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 GPR32O75388 356 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 MCF2P10911 925 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 TCP1P17987 556 aaKnown RBP13.89□□□□□ -0.19
SMAD3-207ENST00000558763 ABCB4P21439 1286 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 CXCR5P32302 372 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
SMAD3-207ENST00000558763 OSTNP61366 133 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 WDR44Q5JSH3 913 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 TMEM130Q8N3G9 435 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 MSANTD4Q8NCY6 345 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 SLC35G2Q8TBE7 412 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 WNT8BQ93098 351 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 ABCB6Q9NP58 842 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 EHD2Q9NZN4 543 aa13.89□□□□□ -0.19
SMAD3-207ENST00000558763 PDCD11Q14690 1871 aaKnown RBP13.88□□□□□ -0.19
SMAD3-207ENST00000558763 ARVCFO00192 962 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
SMAD3-207ENST00000558763 PDE6CP51160 858 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 ZNF132P52740 706 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 HADHBP55084 474 aaKnown RBP13.88□□□□□ -0.19
SMAD3-207ENST00000558763 KIZQ2M2Z5 673 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 SLC43A3Q8NBI5 491 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 NLRP7Q8WX94 980 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 PNKPQ96T60 521 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 CDHR5Q9HBB8 845 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 SEPT11Q9NVA2 429 aaKnown RBP13.88□□□□□ -0.19
SMAD3-207ENST00000558763 ZNF446Q9NWS9 450 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 SMARCAL1Q9NZC9 954 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 SIX4Q9UIU6 781 aa13.88□□□□□ -0.19
SMAD3-207ENST00000558763 A0A1B0GUA9 196 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 RTN2O75298 545 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 NFICP08651 508 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 CLCN6P51797 869 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 MYL6P60660 151 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 ITIH3Q06033 890 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 PTPN11Q06124 597 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 SURF1Q15526 300 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 DUOXA2Q1HG44 320 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 TAF2Q6P1X5 1199 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 SERINC5Q86VE9 423 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 PAWRQ96IZ0 340 aaKnown RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 PARD6BQ9BYG5 372 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 BUB1BO60566 1050 aaPredicted RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
SMAD3-207ENST00000558763 KIF4AO95239 1232 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 CTSHP09668 335 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 COL6A1P12109 1028 aa13.87□□□□□ -0.19
SMAD3-207ENST00000558763 KRT5P13647 590 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms