RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 PSMC3IPQ9P2W1 217 aaPredicted RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 TUBGCP4Q9UGJ1 667 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 CHMP2BQ9UQN3 213 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 ZNF536O15090 1300 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 NFASCO94856 1347 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 RGL2O15211 777 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 BUD23O43709 281 aaKnown RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 SLC37A4O43826 429 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 RNASEH1O60930 286 aaKnown RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 FTLP02792 175 aaPredicted RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 CYP1A2P05177 515 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 GAP43P17677 238 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 KRT15P19012 456 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 ADCY8P40145 1251 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 FMO5P49326 533 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 GEMIN4P57678 1058 aaKnown RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 SLC44A4Q53GD3 710 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 C1orf228Q6PIY5 440 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 RINLQ6ZS11 566 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 RASSF3Q86WH2 238 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 ZBED8Q8IZ13 594 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 FAM172AQ8WUF8 416 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 FAM163AQ96GL9 167 aaPredicted RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 PRICKLE1Q96MT3 831 aaPredicted RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 DDX50Q9BQ39 737 aaKnown RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 NUDT12Q9BQG2 462 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.334e-6■■■■■ 72.1
HMBOX1-212ENST00000558662 BARX2Q9UMQ3 279 aaPredicted RBP17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 PCDHA12Q9UN75 941 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 SORCS3Q9UPU3 1222 aa17.12■□□□□ 0.33
HMBOX1-212ENST00000558662 EML1O00423 815 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 CCNFP41002 786 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 KCNJ1P48048 391 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 SLC12A3P55017 1021 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 PTP4A2Q12974 167 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 MPP3Q13368 585 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 KBTBD12Q3ZCT8 623 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 ANKRD20A4Q4UJ75 823 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 C12orf60Q5U649 245 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 ZNF34Q8IZ26 560 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 PSPC1Q8WXF1 523 aaKnown RBP17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 FGFBP2Q9BYJ0 223 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 MRPS26Q9BYN8 205 aaKnown RBP17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 DCLK3Q9C098 648 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 KLHL4Q9C0H6 718 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 GPR88Q9GZN0 384 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 GLT8D2Q9H1C3 349 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 RHBDL2Q9NX52 303 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 TBC1D7Q9P0N9 293 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 PADI4Q9UM07 663 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 NEU2Q9Y3R4 380 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 WASF2Q9Y6W5 498 aa17.11■□□□□ 0.33
HMBOX1-212ENST00000558662 KLF11O14901 512 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 PLSCR1O15162 318 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 P4HA2O15460 535 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 RPA3P35244 121 aaPredicted RBP17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 MESDQ14696 234 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 CCNG2Q16589 344 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 AADACL2Q6P093 401 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 LMOD2Q6P5Q4 547 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 LVRNQ6Q4G3 990 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 CCDC80Q76M96 950 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 NSUN4Q96CB9 384 aaKnown RBP17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 FAM161BQ96MY7 647 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 KANSL3Q9P2N6 904 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 BIN2Q9UBW5 565 aaPredicted RBP17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 GTF3C4Q9UKN8 822 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 TMED5Q9Y3A6 229 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 CBFA2T3O75081 653 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 TSPY3P0CV98 308 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 TSPY8P0CW00 308 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 CHRNB2P17787 502 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 MARCKSL1P49006 195 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 SLC1A5Q15758 541 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 ECM1Q16610 540 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 DHDDSQ86SQ9 333 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 FAM186BQ8IYM0 893 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 SPOCK2Q92563 424 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 FAM81BQ96LP2 452 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 AGBL1Q96MI9 1066 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 TMEM47Q9BQJ4 181 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 TSSK1BQ9BXA7 367 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 INTS2Q9H0H0 1204 aaKnown RBP17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 MANSC1Q9H8J5 431 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 OLFML3Q9NRN5 406 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 FAIMQ9NVQ4 179 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 KCNK4Q9NYG8 393 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 GRID1Q9ULK0 1009 aa17.1■□□□□ 0.33
HMBOX1-212ENST00000558662 ASTN1O14525 1302 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 A6NJR5 290 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 PIK3CDO00329 1044 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 MARCH6O60337 910 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 LRRN2O75325 713 aa17.09■□□□□ 0.33
HMBOX1-212ENST00000558662 CAMTA2O94983 1202 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms