RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 C1orf112Q9NSG2 853 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 CCM2LQ9NUG4 571 aaPredicted RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 PTPN22Q9Y2R2 807 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 ZNF281Q9Y2X9 895 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 PCDHA11Q9Y5I1 949 aa11.35□□□□□ -0.59
MARK3-213ENST00000558611 KIAA0100Q14667 2235 aaKnown RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 FRMPD2Q68DX3 1309 aaPredicted RBP11.35□□□□□ -0.59
MARK3-213ENST00000558611 HMX2A2RU54 273 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 TNRC18O15417 2968 aaPredicted RBP11.34□□□□□ -0.59
MARK3-213ENST00000558611 PRDM1O75626 825 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
MARK3-213ENST00000558611 PSMC4P43686 418 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 HERVK_113P62684 666 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 TEKQ02763 1124 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 FIGNQ5HY92 759 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 LCE2AQ5TA79 106 aaPredicted RBP11.34□□□□□ -0.59
MARK3-213ENST00000558611 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
MARK3-213ENST00000558611 CWC27Q6UX04 472 aaKnown RBP11.34□□□□□ -0.59
MARK3-213ENST00000558611 ZNF444Q8N0Y2 327 aaPredicted RBP11.34□□□□□ -0.59
MARK3-213ENST00000558611 ANKRD13CQ8N6S4 541 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 DLG3Q92796 817 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 SEMA3GQ9NS98 782 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 MORF4L1Q9UBU8 362 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 ANAPC4Q9UJX5 808 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
MARK3-213ENST00000558611 RAXQ9Y2V3 346 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 TMX2Q9Y320 296 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 B3GALT1Q9Y5Z6 326 aa11.34□□□□□ -0.59
MARK3-213ENST00000558611 IGKV6D-41A0A0C4DH26 115 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 MAN2B1O00754 1011 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 KDM1AO60341 852 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 CLASP2O75122 1294 aaKnown RBP11.33□□□□□ -0.6
MARK3-213ENST00000558611 FGAP02671 866 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 CEACAM5P06731 702 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 PDCD1Q15116 288 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 CLUL1Q15846 466 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 IL31Q6EBC2 164 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 B3GNT9Q6UX72 402 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 NLGN4XQ8N0W4 816 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 LPAR1Q92633 364 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 P2RX7Q99572 595 aaKnown RBP11.33□□□□□ -0.6
MARK3-213ENST00000558611 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
MARK3-213ENST00000558611 VCPKMTQ9H867 229 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 STOML1Q9UBI4 398 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 SRPK3Q9UPE1 567 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 COA3Q9Y2R0 106 aaPredicted RBP11.33□□□□□ -0.6
MARK3-213ENST00000558611 U3KQE9 123 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 RAD50Q92878 1312 aa11.33□□□□□ -0.6
MARK3-213ENST00000558611 SMCHD1A6NHR9 2005 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 CENPBP07199 599 aaPredicted RBP11.32□□□□□ -0.6
MARK3-213ENST00000558611 TSPY3P0CV98 308 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 TSPY8P0CW00 308 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 COL6A2P12110 1019 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 HTR3AP46098 478 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 NEK3P51956 506 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 PRMT2P55345 433 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 ACAP2Q15057 778 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 KIAA1755Q5JYT7 1200 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
MARK3-213ENST00000558611 FSTL4Q6MZW2 842 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 ZPBP2Q6X784 338 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 C11orf96Q7Z7L8 435 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 SHISA5Q8N114 240 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 SLC35G2Q8TBE7 412 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 NYAP2Q9P242 653 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 USP36Q9P275 1121 aaKnown RBP11.32□□□□□ -0.6
MARK3-213ENST00000558611 SRRDQ9UH36 339 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
MARK3-213ENST00000558611 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
MARK3-213ENST00000558611 KCNK3O14649 394 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 TNPO2O14787 897 aaKnown RBP11.31□□□□□ -0.6
MARK3-213ENST00000558611 WDR46O15213 610 aaKnown RBP11.31□□□□□ -0.6
MARK3-213ENST00000558611 NKRFO15226 690 aaKnown RBP eCLIP11.31□□□□□ -0.6
MARK3-213ENST00000558611 ORC4O43929 436 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 DGKIO75912 1065 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 FPR2P25090 351 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 HOXD10P28358 340 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 ZRSR2Q15696 482 aaKnown RBP11.31□□□□□ -0.6
MARK3-213ENST00000558611 IFI16Q16666 785 aaKnown RBP11.31□□□□□ -0.6
MARK3-213ENST00000558611 FAM47AQ5JRC9 791 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 RIOX2Q8IUF8 465 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 SPICE1Q8N0Z3 855 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 SH3RF2Q8TEC5 729 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 JADE3Q92613 823 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 CEP95Q96GE4 821 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 MFSD14AQ96MC6 490 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 CSRNP2Q9H175 543 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 IL25Q9H293 177 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 MS4A5Q9H3V2 200 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 SP110Q9HB58 689 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 SLC6A20Q9NP91 592 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 MTMR4Q9NYA4 1195 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.31□□□□□ -0.6
MARK3-213ENST00000558611 MARCH2Q9P0N8 246 aa11.31□□□□□ -0.6
MARK3-213ENST00000558611 SCDO00767 359 aa11.3□□□□□ -0.6
MARK3-213ENST00000558611 PEX10O60683 326 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms