RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TCRBV7S2A1N4TA0A589 114 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 KIAA0391O15091 583 aaKnown RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 CALB1P05937 261 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 MAGEA4P43358 317 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 RRP1BQ14684 758 aaKnown RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 DUOXA2Q1HG44 320 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 NBPF12Q5TAG4 269 aaPredicted RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 PRUNE1Q86TP1 453 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 C1orf131Q8NDD1 294 aaKnown RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 FAM149B1Q96BN6 582 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 PCDHB18PQ96TA0 734 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 USP15Q9Y4E8 981 aaPredicted RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 IVNS1ABPQ9Y6Y0 642 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 MUTP22033 750 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 FNTAP49354 379 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 C11orf63Q6NUN7 778 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 BTNL9Q6UXG8 535 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 PXMP2Q9NR77 195 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 RCN2Q14257 317 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 KIF22Q14807 665 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 KCNT1Q5JUK3 1230 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 CPNE8Q86YQ8 564 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 SULF1Q8IWU6 871 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 RAB3IPQ96QF0 476 aaPredicted RBP16.38■□□□□ 0.21
AP4E1-202ENST00000558439 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 ADPGKQ9BRR6 497 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 TRABDQ9H4I3 376 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 BTNL10A8MVZ5 291 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 EXTL3O43909 919 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 TFDP1Q14186 410 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 CCHCR1Q8TD31 782 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 CTNNAL1Q9UBT7 734 aa16.38■□□□□ 0.21
AP4E1-202ENST00000558439 RIPK2O43353 540 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 ERFP50548 548 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 SPDYE2Q495Y8 402 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 PLIN4Q96Q06 1357 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 PRPSAP2O60256 369 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 GRAP2O75791 330 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 KRT3P12035 628 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 SCTRP47872 440 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 GPC3P51654 580 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 ARL4CP56559 192 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 DNAJC3Q13217 504 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 ANGEL2Q5VTE6 544 aaKnown RBP16.37■□□□□ 0.21
AP4E1-202ENST00000558439 TRIM72Q6ZMU5 477 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 CD302Q8IX05 232 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 SEMA4DQ92854 862 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 FAM129AQ9BZQ8 928 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 CUL2Q13617 745 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 SUPT20HL1Q3ZLR7 823 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 MAP7D3Q8IWC1 876 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 TTC16Q8NEE8 873 aa16.37■□□□□ 0.21
AP4E1-202ENST00000558439 NFX1Q12986 1120 aaKnown RBP16.36■□□□□ 0.21
AP4E1-202ENST00000558439 QPCTQ16769 361 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 CFAP157Q5JU67 520 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 CYB5D1Q6P9G0 228 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 PPFIBP2Q8ND30 876 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 FEZF2Q8TBJ5 459 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 MRPL4Q9BYD3 311 aaKnown RBP16.36■□□□□ 0.21
AP4E1-202ENST00000558439 MED7O43513 233 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 MAP3K6O95382 1288 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 MYBPC2Q14324 1141 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 STAT4Q14765 748 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 SLC15A2Q16348 729 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 DUPD1Q68J44 220 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 MCOLN2Q8IZK6 566 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 FAF2Q96CS3 445 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 LRRC37BQ96QE4 947 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 PCDHA3Q9Y5H8 950 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 M0QYV0 167 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 MAPK13O15264 365 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 GMPSP49915 693 aaPredicted RBP16.36■□□□□ 0.21
AP4E1-202ENST00000558439 JAM2P57087 298 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 NLRP11P59045 1033 aaKnown RBP16.36■□□□□ 0.21
AP4E1-202ENST00000558439 FMO1Q01740 532 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 CLEC16AQ2KHT3 1053 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 C1orf228Q6PIY5 440 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 NLRP7Q8WX94 980 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 KREMEN1Q96MU8 473 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 COL20A1Q9P218 1284 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 HACL1Q9UJ83 578 aa16.36■□□□□ 0.21
AP4E1-202ENST00000558439 FAM102AQ5T9C2 384 aaPredicted RBP16.35■□□□□ 0.21
AP4E1-202ENST00000558439 NME8Q8N427 588 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 MRIQ9BWK5 157 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 SLIT2O94813 1529 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 DDX3YO15523 660 aaKnown RBP16.35■□□□□ 0.21
AP4E1-202ENST00000558439 CSDE1O75534 798 aaKnown RBP16.35■□□□□ 0.21
AP4E1-202ENST00000558439 HIF1AQ16665 826 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 ZNF354CQ86Y25 554 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 GBP7Q8N8V2 638 aaPredicted RBP16.35■□□□□ 0.21
AP4E1-202ENST00000558439 TSNARE1Q96NA8 513 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 MTMR12Q9C0I1 747 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 ADAMTS7Q9UKP4 1686 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 YDJCA8MPS7 323 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 EDIL3O43854 480 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 CST8O60676 142 aa16.35■□□□□ 0.21
AP4E1-202ENST00000558439 PRKCBP05771 671 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms