RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CHP1Q99653 195 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 TOPORSQ9NS56 1045 aaPredicted RBP14.65□□□□□ -0.07
SPG11-210ENST00000558319 TMEM2Q9UHN6 1383 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 HEG1Q9ULI3 1381 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 LOC100653049A0A140TA62 436 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 CAPN15O75808 1086 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 KRT34O76011 436 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 MGAT5BQ3V5L5 792 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 APOL5Q9BWW9 433 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 FARP1Q9Y4F1 1045 aaPredicted RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 ZNF263O14978 683 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 FKBP9O95302 570 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 TXNP10599 105 aaKnown RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 IFNAR1P17181 557 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 PBLDP30039 288 aaPredicted RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 DNAL1Q4LDG9 190 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 ARHGAP17Q68EM7 881 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 FKBP9P1Q75LS8 142 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 MICU2Q8IYU8 434 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 PABPC5Q96DU9 382 aaKnown RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 DNAJC7Q99615 494 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 RANBP17Q9H2T7 1088 aaKnown RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 KLK14Q9P0G3 267 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 PRRG1O14668 218 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 CYTH3O43739 400 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 STX3Q13277 289 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 EPC2Q52LR7 807 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 TMC5Q6UXY8 1006 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 FMR1NBQ8N0W7 255 aaPredicted RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 TUBGCP3Q96CW5 907 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 SIKE1Q9BRV8 207 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 IP6K2Q9UHH9 426 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 A0A1B0GW55 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4L2P0CJ85 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4L3P0CJ86 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4L4P0CJ87 422 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4L5P0CJ88 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4L6P0CJ89 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4L7P0CJ90 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 AVPR1AP37288 418 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 TOB2Q14106 344 aaPredicted RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 MAPRE1Q15691 268 aaKnown RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 XXYLT1Q8NBI6 393 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 HIC2Q96JB3 615 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 C10orf88Q9H8K7 445 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 DUX4Q9UBX2 424 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 TLR2O60603 784 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 GSNP06396 782 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 PCP11498 1178 aaKnown RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 RCN1Q15293 331 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 TMEM35BQ8NCS4 154 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 STRBPQ96SI9 672 aaKnown RBP14.64□□□□□ -0.07
SPG11-210ENST00000558319 C17orf80Q9BSJ5 609 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 ATP7AQ04656 1500 aa14.64□□□□□ -0.07
SPG11-210ENST00000558319 ZBTB39O15060 712 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 AGTP01019 485 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 AKR1B1P15121 316 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 PDAP1Q13442 181 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 QRICH1Q2TAL8 776 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 DCAF4Q8WV16 495 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 C9orf72Q96LT7 481 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 ZIM3Q96PE6 472 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 DIABLOQ9NR28 239 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 SUPT3HB4E1H0 165 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 MRPS35P82673 323 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 DSG1Q02413 1049 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 EFHC2Q5JST6 749 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 C16orf89Q6UX73 402 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 CCDC149Q6ZUS6 474 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 CCDC60Q8IWA6 550 aaPredicted RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 HASPINQ8TF76 798 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 CCT8L1PA6NM43 557 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 F5H6K3 240 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 ASAP2O43150 1006 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 SRP72O76094 671 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 OR1G1P47890 313 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 KLRC3Q07444 240 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 TTC33Q6PID6 262 aaPredicted RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 NSUN6Q8TEA1 469 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 BPIFA3Q9BQP9 254 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 SNX9Q9Y5X1 595 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 MYO1DO94832 1006 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 WEE1P30291 646 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 EIF3EP60228 445 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 STAT4Q14765 748 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 PKN3Q6P5Z2 889 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 HORMAD1Q86X24 394 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 PI4K2AQ9BTU6 479 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 LDHAP00338 332 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 TPP2P29144 1249 aaPredicted RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 SOAT1P35610 550 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 DHX34Q14147 1143 aaKnown RBP14.63□□□□□ -0.07
SPG11-210ENST00000558319 SURF1Q15526 300 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 ELMSAN1Q6PJG2 1045 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 DCUN1D1Q96GG9 259 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 TMEM106CQ9BVX2 250 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 ZNF556Q9HAH1 456 aa14.63□□□□□ -0.07
SPG11-210ENST00000558319 PCDHGB4Q9UN71 923 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms