RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SPAG5Q96R06 1193 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 PPP1R9BQ96SB3 815 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 GAD1Q99259 594 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 LSM14BQ9BX40 385 aaKnown RBP13.35□□□□□ -0.27
TPM1-209ENST00000558072 KLK14Q9P0G3 267 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 CAPN11Q9UMQ6 739 aa13.35□□□□□ -0.27
TPM1-209ENST00000558072 RALGAPA2Q2PPJ7 1873 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 GBF1Q92538 1859 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 AKR1B15C9JRZ8 316 aaPredicted RBP13.34□□□□□ -0.27
TPM1-209ENST00000558072 UPP2O95045 317 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 ASS1P00966 412 aaKnown RBP13.34□□□□□ -0.27
TPM1-209ENST00000558072 RGS19P49795 217 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 WDR5P61964 334 aaKnown RBP13.34□□□□□ -0.27
TPM1-209ENST00000558072 ZNF699Q32M78 642 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 ZNF667Q5HYK9 610 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
TPM1-209ENST00000558072 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 OR5B17Q8NGF7 314 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 SYN2Q92777 582 aaPredicted RBP13.34□□□□□ -0.27
TPM1-209ENST00000558072 TOP1MTQ969P6 601 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 CRACR2AQ9BSW2 395 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 FAM207AQ9NSI2 230 aaPredicted RBP13.34□□□□□ -0.27
TPM1-209ENST00000558072 CACNG4Q9UBN1 327 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 STK39Q9UEW8 545 aa13.34□□□□□ -0.27
TPM1-209ENST00000558072 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 ITGB3P05106 788 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 UCHL3P15374 230 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 SLC9A1P19634 815 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 TAF6P49848 677 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 BPIFB4P59827 614 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 TNNC1P63316 161 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
TPM1-209ENST00000558072 KCNMA1Q12791 1236 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 SHHQ15465 462 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 LMBRD2Q68DH5 695 aaPredicted RBP13.33□□□□□ -0.28
TPM1-209ENST00000558072 SCARA3Q6AZY7 606 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 DPH6Q7L8W6 267 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 LRRC43Q8N309 656 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 OR8K1Q8NGG5 319 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 SPATA18Q8TC71 538 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 HPDLQ96IR7 371 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 TMEM175Q9BSA9 504 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 NAA15Q9BXJ9 866 aaKnown RBP13.33□□□□□ -0.28
TPM1-209ENST00000558072 AGAP1Q9UPQ3 857 aa13.33□□□□□ -0.28
TPM1-209ENST00000558072 BZW2Q9Y6E2 419 aaKnown RBP13.33□□□□□ -0.28
TPM1-209ENST00000558072 TTC3P53804 2025 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 KIAA1671Q9BY89 1806 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 PDCD11Q14690 1871 aaKnown RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 ANO9A1A5B4 782 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 GRXCR1A8MXD5 290 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 PIRO00625 290 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 PTGESO14684 152 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 ALDH2P05091 517 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 POLR2BP30876 1174 aaKnown RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 STAT1P42224 750 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 SCNN1GP51170 649 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 POLR2FP61218 127 aaKnown RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 TBX2Q13207 712 aaPredicted RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 PAN2Q504Q3 1202 aaKnown RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 GLRA4Q5JXX5 417 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 CLLU1OSQ5K130 101 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 C9orf57Q5W0N0 161 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 DCLRE1AQ6PJP8 1040 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 PPM1KQ8N3J5 372 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 LMO3Q8TAP4 145 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 HELQQ8TDG4 1101 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 HERVK_113Q902F9 699 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 ZMAT2Q96NC0 199 aaKnown RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 COLEC11Q9BWP8 271 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 NIF3L1Q9GZT8 377 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
TPM1-209ENST00000558072 AAASQ9NRG9 546 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 DSEQ9UL01 958 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 PLAGL2Q9UPG8 496 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 INPP5FQ9Y2H2 1132 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 TRIP11Q15643 1979 aa13.32□□□□□ -0.28
TPM1-209ENST00000558072 TMEM189-UBE2V1I3L0A0 370 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 B4GALT3O60512 393 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 DGKIO75912 1065 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 KIF4AO95239 1232 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 VNN1O95497 513 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 FERP16591 822 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 KRT9P35527 623 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 GUCY2FP51841 1108 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 MYL6P60660 151 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 MLLT1Q03111 559 aaPredicted RBP13.31□□□□□ -0.28
TPM1-209ENST00000558072 ELAVL2Q12926 359 aaKnown RBP13.31□□□□□ -0.28
TPM1-209ENST00000558072 VPS36Q86VN1 386 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
TPM1-209ENST00000558072 CRIPAKQ8N1N5 446 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 SPC24Q8NBT2 197 aa13.31□□□□□ -0.28
TPM1-209ENST00000558072 GSTCDQ8NEC7 633 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms