RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 STYXL1Q9Y6J8 313 aa9.57□□□□□ -0.88
SNRPA1-206ENST00000558059 TRAPPC3O43617 180 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 TBC1D4O60343 1298 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 ZMYND10O75800 440 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 OR1D2P34982 312 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 KCNA1Q09470 495 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 RAB33AQ14088 237 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 MRPL58Q14197 206 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 KYAT1Q16773 422 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 PTPN21Q16825 1174 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 ELMSAN1Q6PJG2 1045 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 SMG7Q92540 1137 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 STAMQ92783 540 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 HVCN1Q96D96 273 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 SUSD3Q96L08 255 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 MSTO1Q9BUK6 570 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 FGFBP2Q9BYJ0 223 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 PRKD2Q9BZL6 878 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 MRPL44Q9H9J2 332 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 RPF1Q9H9Y2 349 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 WDR6Q9NNW5 1121 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 OLFML3Q9NRN5 406 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 KBTBD4Q9NVX7 518 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 TBC1D7Q9P0N9 293 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 LIMD1Q9UGP4 676 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 FBXW11Q9UKB1 542 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 CPSF3Q9UKF6 684 aaKnown RBP9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 BACE2Q9Y5Z0 518 aa9.56□□□□□ -0.88
SNRPA1-206ENST00000558059 CACNA1HO95180 2353 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 SYN3O14994 580 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 N4BP1O75113 896 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 IDEP14735 1019 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 CYP3A5P20815 502 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ADSSP30520 456 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 LRPAP1P30533 357 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ACOT2P49753 483 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 GUCY2FP51841 1108 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 CASP5P51878 434 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 PPP2R3AQ06190 1150 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 L1TD1Q5T7N2 865 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ATL3Q6DD88 541 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ADALQ6DHV7 355 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 SLFN12LQ6IEE8 588 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 CRELD2Q6UXH1 353 aaPredicted RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 TRIM67Q6ZTA4 783 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 CCDC149Q6ZUS6 474 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 HFE2Q6ZVN8 426 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ANKS3Q6ZW76 656 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 OTOP3Q7RTS5 596 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 TDRD5Q8NAT2 981 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 KCNG4Q8TDN1 519 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 TSPAN18Q96SJ8 248 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 MFRPQ9BY79 579 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 TNMDQ9H2S6 317 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 PANK4Q9NVE7 773 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ZDHHC7Q9NXF8 308 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 AGO2Q9UKV8 859 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 UBQLN1Q9UMX0 589 aaKnown RBP9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 PCDHA7Q9UN72 937 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 CDY1Q9Y6F8 540 aa9.55□□□□□ -0.88
SNRPA1-206ENST00000558059 TMEM221A6NGB7 291 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 M0QZQ0 153 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 M0R296 226 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 GCNT3O95395 438 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 ASGR2P07307 311 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 C8AP07357 584 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 HNRNPA1P09651 372 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 AARSP49588 968 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 POU5F1Q01860 360 aaKnown RBP9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 POSTNQ15063 836 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 UVSSAQ2YD98 709 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 SPATA1Q5VX52 437 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 JADE1Q6IE81 842 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 SLC8B1Q6J4K2 584 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 CD302Q8IX05 232 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 IQUBQ8NA54 791 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 ZSWIM2Q8NEG5 633 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 DHX58Q96C10 678 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 ACSF2Q96CM8 615 aaPredicted RBP9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 ACCSQ96QU6 501 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 MYADMQ96S97 322 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 TRIM9Q9C026 710 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 CUEDC2Q9H467 287 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 NUB1Q9Y5A7 615 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 CLUHO75153 1309 aa9.54□□□□□ -0.88
SNRPA1-206ENST00000558059 WDR27A2RRH5 827 aa9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 H7C4K7 107 aa9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 PPEF2O14830 753 aa9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 POLR2DO15514 142 aaKnown RBP9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 XPOTO43592 962 aaKnown RBP9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 PRPF6O94906 941 aaKnown RBP9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 ABLIM3O94929 683 aa9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 NFICP08651 508 aa9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 POU2F2P09086 479 aa9.53□□□□□ -0.88
SNRPA1-206ENST00000558059 HOXA9P31269 272 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms