RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ZACNQ401N2 412 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 C15orf39Q6ZRI6 1047 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 SLC39A11Q8N1S5 342 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 TGS1Q96RS0 853 aaKnown RBP16.49■□□□□ 0.23
NEDD1-213ENST00000557644 TUBGCP2Q9BSJ2 902 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 ITGA11Q9UKX5 1188 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 AGAP1Q9UPQ3 857 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 PCDHB12Q9Y5F1 795 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 KIAA1671Q9BY89 1806 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 PIRO00625 290 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 VNN1O95497 513 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 RPL9P32969 192 aaKnown RBP16.49■□□□□ 0.23
NEDD1-213ENST00000557644 KLHL23Q8NBE8 558 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 UROC1Q96N76 676 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 TMEM8AQ9HCN3 771 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEDD1-213ENST00000557644 AAASQ9NRG9 546 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 TAB2Q9NYJ8 693 aa16.49■□□□□ 0.23
NEDD1-213ENST00000557644 TRANK1O15050 2925 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 I3L4J1 428 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 SPTLC1O15269 473 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 PHACTR2O75167 634 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
NEDD1-213ENST00000557644 EEF1GP26641 437 aaKnown RBP16.48■□□□□ 0.23
NEDD1-213ENST00000557644 MXI1P50539 228 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 ERVK-21P61565 698 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 KRT31Q15323 416 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 TAS1R2Q8TE23 839 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 ARNTL2Q8WYA1 636 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 DDX27Q96GQ7 796 aaKnown RBP16.48■□□□□ 0.23
NEDD1-213ENST00000557644 IGSF21Q96ID5 467 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 EPOPA6NHQ4 379 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
NEDD1-213ENST00000557644 FMO5P49326 533 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 AP3M2P53677 418 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 MIIPQ5JXC2 388 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 KRT39Q6A163 491 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 DCLRE1AQ6PJP8 1040 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 COLEC11Q9BWP8 271 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 SPG21Q9NZD8 308 aa16.48■□□□□ 0.23
NEDD1-213ENST00000557644 TADA2AO75478 443 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 FGF18O76093 207 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 GTF2H1P32780 548 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 BRCC3P46736 316 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 LILRA4P59901 499 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 MYL6P60660 151 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 RBP5P82980 135 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 NCOA4Q13772 614 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 MAN2A1Q16706 1144 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 VN1R3Q9BXE9 311 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 GPR62Q9BZJ7 368 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 ALG13Q9NP73 1137 aaKnown RBP16.47■□□□□ 0.23
NEDD1-213ENST00000557644 ADAM28Q9UKQ2 775 aa16.47■□□□□ 0.23
NEDD1-213ENST00000557644 CSPG5O95196 566 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 AFPP02771 609 aaKnown RBP16.46■□□□□ 0.23
NEDD1-213ENST00000557644 APTXQ7Z2E3 356 aaKnown RBP16.46■□□□□ 0.23
NEDD1-213ENST00000557644 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 VPS16Q9H269 839 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 NUB1Q9Y5A7 615 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 SCN1AP35498 2009 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 C5orf67F2Z3F1 127 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 STX10O60499 249 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 TRPC3Q13507 836 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 VWA3BQ502W6 1294 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 TIGD5Q53EQ6 642 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 TAS1R1Q7RTX1 841 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 TMEM169Q96HH4 297 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 B3GALT6Q96L58 329 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 XYLT2Q9H1B5 865 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 RBSNQ9H1K0 784 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 TTYH1Q9H313 450 aaPredicted RBP16.46■□□□□ 0.23
NEDD1-213ENST00000557644 ZNF576Q9H609 170 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 RWDD3Q9Y3V2 267 aa16.46■□□□□ 0.23
NEDD1-213ENST00000557644 TMEM189-UBE2V1I3L0A0 370 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 RFXAPO00287 272 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 PES1O00541 588 aaKnown RBP16.45■□□□□ 0.22
NEDD1-213ENST00000557644 PIK3CAP42336 1068 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 MYL7Q01449 175 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 HABP4Q5JVS0 413 aaKnown RBP16.45■□□□□ 0.22
NEDD1-213ENST00000557644 FBXO22Q8NEZ5 403 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 HPDLQ96IR7 371 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 PLVAPQ9BX97 442 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 NDST4Q9H3R1 872 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 LIMA1Q9UHB6 759 aaKnown RBP16.45■□□□□ 0.22
NEDD1-213ENST00000557644 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.45■□□□□ 0.22
NEDD1-213ENST00000557644 NLRC5Q86WI3 1866 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 MYO9BQ13459 2157 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 DNAJB1P25685 340 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 PPM1AP35813 382 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 SPOPLQ6IQ16 392 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 FUT10Q6P4F1 479 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 LRRC52Q8N7C0 313 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 CRACR2AQ9BSW2 395 aa16.45■□□□□ 0.22
NEDD1-213ENST00000557644 R3HCC1Q9Y3T6 440 aaKnown RBP16.45■□□□□ 0.22
NEDD1-213ENST00000557644 EYSQ5T1H1 3165 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 GRM6O15303 877 aa16.44■□□□□ 0.22
NEDD1-213ENST00000557644 TAF6P49848 677 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms