RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 CNNM1Q9NRU3 951 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 STK32BQ9NY57 414 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 PPP4R1LQ9P1A2 415 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.73□□□□□ -1.49
PRPF39-212ENST00000557477 CPNE7Q9UBL6 633 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 SLC45A2Q9UMX9 530 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 SH3BP1Q9Y3L3 701 aa5.73□□□□□ -1.49
PRPF39-212ENST00000557477 ABCC8Q09428 1581 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 DNMBPQ6XZF7 1577 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 TBKBP1A7MCY6 615 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 RHPN2P1A8MT19 583 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 SLC43A1O75387 559 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 BRAFP15056 766 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 SLC6A2P23975 617 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 RPS19P39019 145 aaKnown RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 JAG1P78504 1218 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 CNGA2Q16280 664 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 C10orf62Q5T681 223 aaPredicted RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 EMC10Q5UCC4 262 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 TCTN3Q6NUS6 607 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 DOK3Q7L591 496 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 GPRIN1Q7Z2K8 1008 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 SKAP1Q86WV1 359 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 SIAH1Q8IUQ4 282 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 FUKQ8N0W3 1084 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 GIMAP8Q8ND71 665 aaPredicted RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 MORC4Q8TE76 937 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 TFAP2CQ92754 450 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 TNIP3Q96KP6 325 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 MYD88Q99836 296 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 ARPC5LQ9BPX5 153 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 CPPED1Q9BRF8 314 aaPredicted RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 POLR3GLQ9BT43 218 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 TRIM54Q9BYV2 358 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 ADAM7Q9H2U9 754 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 ZCCHC4Q9H5U6 513 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 KIAA1586Q9HCI6 787 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 GNL3LQ9NVN8 582 aaKnown RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 PIH1D1Q9NWS0 290 aaKnown RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 PLA2G3Q9NZ20 509 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 RSF1Q96T23 1441 aaPredicted RBP5.72□□□□□ -1.49
PRPF39-212ENST00000557477 ADAMTS20P59510 1910 aa5.72□□□□□ -1.49
PRPF39-212ENST00000557477 CDHR4A6H8M9 788 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 OTOL1A6NHN0 477 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 RASA4BC9J798 803 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 RASA4O43374 803 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 HAUS5O94927 633 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 GJB1P08034 283 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 GNAI3P08754 354 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 GNAT2P19087 354 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 EN2P19622 333 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 CASP5P51878 434 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ARFIP2P53365 341 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 SUMO3P55854 103 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 GNAI1P63096 354 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 NOMO3P69849 1222 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 FMO1Q01740 532 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 FOXL1Q12952 345 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 MORC3Q14149 939 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 KIF22Q14807 665 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ELAVL1Q15717 326 aaKnown RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 TBC1D10BQ4KMP7 808 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ATXN7L2Q5T6C5 722 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 TOGARAM2Q6ZUX3 1019 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ZNF365Q70YC5 407 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 APBB1IPQ7Z5R6 666 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 FAM83AQ86UY5 434 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 SESTD1Q86VW0 696 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 EXOC8Q8IYI6 725 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 FAM186BQ8IYM0 893 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 MB21D1Q8N884 522 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 PCSK9Q8NBP7 692 aaKnown RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 PGBD4Q96DM1 585 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 SGCZQ96LD1 299 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 CCDC138Q96M89 665 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 GSTO2Q9H4Y5 243 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 BRD9Q9H8M2 597 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ZNF287Q9HBT7 754 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 SPON1Q9HCB6 807 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 NLRC4Q9NPP4 1024 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 JKAMPQ9P055 326 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ZDHHC8Q9ULC8 765 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 OGDHLQ9ULD0 1010 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 HDAC5Q9UQL6 1122 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 DMTF1Q9Y222 760 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 SNX13Q9Y5W8 968 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.71□□□□□ -1.5
PRPF39-212ENST00000557477 SYNJ1O43426 1573 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 ZNF536O15090 1300 aa5.71□□□□□ -1.5
PRPF39-212ENST00000557477 PRR5-ARHGAP8B1AHC4 643 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 ISM1B1AKI9 464 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 F8W8V4 182 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 FOXS1O43638 330 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 RAD17O75943 681 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 POMCP01189 267 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 AMHP03971 560 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 INHBBP09529 407 aa5.7□□□□□ -1.5
PRPF39-212ENST00000557477 ZKSCAN1P17029 563 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms