RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 ATRIPQ8WXE1 791 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 CLDN23Q96B33 292 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 ELSPBP1Q96BH3 223 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 ACAP3Q96P50 834 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 PLIN2Q99541 437 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 TCHPQ9BT92 498 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 MRPL4Q9BYD3 311 aaKnown RBP15.42■□□□□ 0.06
SLIRP-210ENST00000557431 OSBPL6Q9BZF3 934 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 FOXP1Q9H334 677 aaPredicted RBP15.42■□□□□ 0.06
SLIRP-210ENST00000557431 DLL3Q9NYJ7 618 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 ARHGAP28Q9P2N2 729 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 FRYLO94915 3013 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 NCOR2Q9Y618 2525 aa15.42■□□□□ 0.06
SLIRP-210ENST00000557431 SPTLC1O15269 473 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 CPB1P15086 417 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 ATF2P15336 505 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 PROZP22891 400 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 GDI1P31150 447 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 HOXC13P31276 330 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 GUCY2FP51841 1108 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 PTGDRQ13258 359 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 DMP1Q13316 513 aaPredicted RBP15.41■□□□□ 0.06
SLIRP-210ENST00000557431 MRPL58Q14197 206 aaKnown RBP15.41■□□□□ 0.06
SLIRP-210ENST00000557431 TEAD2Q15562 447 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 RINT1Q6NUQ1 792 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 MPZL3Q6UWV2 235 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 ZNF852Q6ZMS4 543 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 RNF19BQ6ZMZ0 732 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 ZBTB44Q8NCP5 570 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 FBXO18Q8NFZ0 1043 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 DDX12PQ92771 950 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 TBC1D32Q96NH3 1257 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 ASB16Q96NS5 453 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 PGLYRP2Q96PD5 576 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 HAPLN2Q9GZV7 340 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 ZFP14Q9HCL3 533 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 PARD6AQ9NPB6 346 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 TOPORSQ9NS56 1045 aaPredicted RBP15.41■□□□□ 0.06
SLIRP-210ENST00000557431 ZSCAN32Q9NX65 697 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 GDE1Q9NZC3 331 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 CNTN3Q9P232 1028 aa15.41■□□□□ 0.06
SLIRP-210ENST00000557431 CACNA1BQ00975 2339 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 SYN3O14994 580 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 LILRB5O75023 590 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 VNN2O95498 520 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 CXCL8P10145 99 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 MUTP22033 750 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 SLC10A6Q3KNW5 377 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 ZNF280DQ6N043 979 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 APBB1IPQ7Z5R6 666 aaPredicted RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 TCEAL8Q8IYN2 117 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 ZNF687Q8N1G0 1237 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 IGSF22Q8N9C0 903 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 RSPRY1Q96DX4 576 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 MMTAG2Q9BU76 263 aaKnown RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 TRMT61BQ9BVS5 477 aaKnown RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 CRISPLD1Q9H336 500 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 TMEM134Q9H6X4 195 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 ZNF334Q9HCZ1 680 aaPredicted RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 AVENQ9NQS1 362 aaPredicted RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 PRMT8Q9NR22 394 aaPredicted RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 SLC38A7Q9NVC3 462 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 USP18Q9UMW8 372 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 NOL7Q9UMY1 257 aaKnown RBP15.4■□□□□ 0.06
SLIRP-210ENST00000557431 PCDHGA2Q9Y5H1 932 aa15.4■□□□□ 0.06
SLIRP-210ENST00000557431 ANAPC1Q9H1A4 1944 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 NPHP3-ACAD11A0A0J9YXS1 232 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 H7C4K7 107 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 MCF2P10911 925 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 KCNE1P15382 129 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 TNFSF9P41273 254 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 SOX9P48436 509 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 DMWDQ09019 674 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 ORC2Q13416 577 aaPredicted RBP15.39■□□□□ 0.05
SLIRP-210ENST00000557431 STXBP5Q5T5C0 1151 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 ERICH6BQ5W0A0 696 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 C1orf186Q6ZWK4 172 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 FAM184AQ8NB25 1140 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 TTC8Q8TAM2 541 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 ZSCAN18Q8TBC5 510 aaPredicted RBP15.39■□□□□ 0.05
SLIRP-210ENST00000557431 NELL1Q92832 810 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 DNASE1L2Q92874 299 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 EPC1Q9H2F5 836 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 LMAN1LQ9HAT1 526 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 RBM12Q9NTZ6 932 aaKnown RBP15.39■□□□□ 0.05
SLIRP-210ENST00000557431 LIMCH1Q9UPQ0 1083 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 DNM3Q9UQ16 869 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 YIPF1Q9Y548 306 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 PIAS3Q9Y6X2 628 aa15.39■□□□□ 0.05
SLIRP-210ENST00000557431 TPRP12270 2363 aaKnown RBP15.39■□□□□ 0.05
SLIRP-210ENST00000557431 KIAA1549LQ6ZVL6 1849 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 DCDC2BA2VCK2 349 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 PPEF2O14830 753 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 NCAM2O15394 837 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 SOAT2O75908 522 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 TDGF1P13385 188 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 CCNE1P24864 410 aa15.38■□□□□ 0.05
SLIRP-210ENST00000557431 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
SLIRP-210ENST00000557431 MAGEA9P43362 315 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms