RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 MARCH10Q8NA82 808 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 EXT2Q93063 718 aa8.79□□□□□ -1
CHD8-213ENST00000557364 MTG1Q9BT17 334 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 HTATIP2Q9BUP3 242 aa8.79□□□□□ -1
CHD8-213ENST00000557364 SYNDIG1Q9H7V2 258 aa8.79□□□□□ -1
CHD8-213ENST00000557364 TLR2O60603 784 aa8.79□□□□□ -1
CHD8-213ENST00000557364 NPTXRO95502 500 aa8.79□□□□□ -1
CHD8-213ENST00000557364 FTLP02792 175 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 THPOP40225 353 aa8.79□□□□□ -1
CHD8-213ENST00000557364 IL31Q6EBC2 164 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PASD1Q8IV76 773 aa8.79□□□□□ -1
CHD8-213ENST00000557364 RSAD1Q9HA92 442 aa8.79□□□□□ -1
CHD8-213ENST00000557364 ABHD10Q9NUJ1 306 aa8.79□□□□□ -1
CHD8-213ENST00000557364 APEX2Q9UBZ4 518 aa8.79□□□□□ -1
CHD8-213ENST00000557364 STK39Q9UEW8 545 aa8.79□□□□□ -1
CHD8-213ENST00000557364 C5orf58C9J3I9 102 aa8.79□□□□□ -1
CHD8-213ENST00000557364 GNRH1P01148 92 aa8.79□□□□□ -1
CHD8-213ENST00000557364 ATP1A2P50993 1020 aa8.79□□□□□ -1
CHD8-213ENST00000557364 HPCAP84074 193 aa8.79□□□□□ -1
CHD8-213ENST00000557364 SNRNP35Q16560 246 aaKnown RBP8.79□□□□□ -1
CHD8-213ENST00000557364 RBBP7Q16576 425 aa8.79□□□□□ -1
CHD8-213ENST00000557364 MAML1Q92585 1016 aa8.79□□□□□ -1
CHD8-213ENST00000557364 GRAMD1AQ96CP6 724 aa8.79□□□□□ -1
CHD8-213ENST00000557364 NIF3L1Q9GZT8 377 aa8.79□□□□□ -1
CHD8-213ENST00000557364 SAMSN1Q9NSI8 373 aaKnown RBP8.79□□□□□ -1
CHD8-213ENST00000557364 ANXA9O76027 345 aa8.79□□□□□ -1
CHD8-213ENST00000557364 HMOX2P30519 316 aa8.79□□□□□ -1
CHD8-213ENST00000557364 HDAC4P56524 1084 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PDAP1Q13442 181 aaKnown RBP8.79□□□□□ -1
CHD8-213ENST00000557364 C16orf72Q14CZ0 275 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PTPROQ16827 1216 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PKN3Q6P5Z2 889 aa8.79□□□□□ -1
CHD8-213ENST00000557364 EEF2KMTQ96G04 330 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PRPF18Q99633 342 aaKnown RBP8.79□□□□□ -1
CHD8-213ENST00000557364 UNC45AQ9H3U1 944 aa8.79□□□□□ -1
CHD8-213ENST00000557364 VTA1Q9NP79 307 aa8.79□□□□□ -1
CHD8-213ENST00000557364 RGL1Q9NZL6 768 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PCDHB2Q9Y5E7 798 aa8.79□□□□□ -1
CHD8-213ENST00000557364 SYNCRIPO60506 623 aaKnown RBP8.79□□□□□ -1
CHD8-213ENST00000557364 UPP2O95045 317 aa8.79□□□□□ -1
CHD8-213ENST00000557364 CTSHP09668 335 aa8.79□□□□□ -1
CHD8-213ENST00000557364 PDHBP11177 359 aa8.79□□□□□ -1
CHD8-213ENST00000557364 TP53BP2Q13625 1128 aa8.79□□□□□ -1
CHD8-213ENST00000557364 TIGD7Q6NT04 549 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 PID1Q7Z2X4 250 aa8.79□□□□□ -1
CHD8-213ENST00000557364 GPC2Q8N158 579 aa8.79□□□□□ -1
CHD8-213ENST00000557364 MCCC1Q96RQ3 725 aaPredicted RBP8.79□□□□□ -1
CHD8-213ENST00000557364 RRN3Q9NYV6 651 aa8.79□□□□□ -1
CHD8-213ENST00000557364 ARHGAP26Q9UNA1 814 aa8.79□□□□□ -1
CHD8-213ENST00000557364 DIP2BQ9P265 1576 aa8.79□□□□□ -1
CHD8-213ENST00000557364 CCDC78A2IDD5 438 aa8.78□□□□□ -1
CHD8-213ENST00000557364 CCDC22O60826 627 aa8.78□□□□□ -1
CHD8-213ENST00000557364 CDC25AP30304 524 aa8.78□□□□□ -1
CHD8-213ENST00000557364 AXLP30530 894 aa8.78□□□□□ -1
CHD8-213ENST00000557364 CYB5R4Q7L1T6 521 aa8.78□□□□□ -1
CHD8-213ENST00000557364 EPM2AIP1Q7L775 607 aaPredicted RBP8.78□□□□□ -1
CHD8-213ENST00000557364 ZNF438Q7Z4V0 828 aa8.78□□□□□ -1
CHD8-213ENST00000557364 SAAL1Q96ER3 474 aa8.78□□□□□ -1
CHD8-213ENST00000557364 UXTQ9UBK9 157 aaPredicted RBP8.78□□□□□ -1
CHD8-213ENST00000557364 FIS1Q9Y3D6 152 aa8.78□□□□□ -1
CHD8-213ENST00000557364 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.78□□□□□ -1
CHD8-213ENST00000557364 FAM196BA6NMK8 535 aa8.78□□□□□ -1
CHD8-213ENST00000557364 NTSR2O95665 410 aa8.78□□□□□ -1
CHD8-213ENST00000557364 KCNA4P22459 653 aa8.78□□□□□ -1
CHD8-213ENST00000557364 CAP2P40123 477 aa8.78□□□□□ -1
CHD8-213ENST00000557364 FKBP1BP68106 108 aa8.78□□□□□ -1
CHD8-213ENST00000557364 ZBTB17Q13105 803 aa8.78□□□□□ -1
CHD8-213ENST00000557364 ZNF177Q13360 481 aaPredicted RBP8.78□□□□□ -1
CHD8-213ENST00000557364 CEP19Q96LK0 163 aa8.78□□□□□ -1
CHD8-213ENST00000557364 UBXN6Q9BZV1 441 aa8.78□□□□□ -1
CHD8-213ENST00000557364 FAM47E-STBD1D6RA91 191 aa8.78□□□□□ -1
CHD8-213ENST00000557364 EEF2KO00418 725 aaKnown RBP8.78□□□□□ -1
CHD8-213ENST00000557364 GFAPP14136 432 aa8.78□□□□□ -1
CHD8-213ENST00000557364 HADHAP40939 763 aa8.78□□□□□ -1
CHD8-213ENST00000557364 NAMPTP43490 491 aa8.78□□□□□ -1
CHD8-213ENST00000557364 GPS1Q13098 491 aa8.78□□□□□ -1
CHD8-213ENST00000557364 PEX6Q13608 980 aa8.78□□□□□ -1
CHD8-213ENST00000557364 STARD3Q14849 445 aa8.78□□□□□ -1
CHD8-213ENST00000557364 PDIA6Q15084 440 aa8.78□□□□□ -1
CHD8-213ENST00000557364 HIF1AQ16665 826 aa8.78□□□□□ -1
CHD8-213ENST00000557364 ZNF280DQ6N043 979 aa8.78□□□□□ -1
CHD8-213ENST00000557364 GMCL1P1Q8NEA9 526 aa8.78□□□□□ -1
CHD8-213ENST00000557364 NAF1Q96HR8 494 aaKnown RBP8.78□□□□□ -1
CHD8-213ENST00000557364 AGPAT1Q99943 283 aa8.78□□□□□ -1
CHD8-213ENST00000557364 RASA4BC9J798 803 aa8.78□□□□□ -1
CHD8-213ENST00000557364 RASA4O43374 803 aa8.78□□□□□ -1
CHD8-213ENST00000557364 RAG1P15918 1043 aa8.78□□□□□ -1
CHD8-213ENST00000557364 SNCBQ16143 134 aa8.78□□□□□ -1
CHD8-213ENST00000557364 ATL2Q8NHH9 583 aa8.78□□□□□ -1
CHD8-213ENST00000557364 TTC17Q96AE7 1141 aa8.78□□□□□ -1
CHD8-213ENST00000557364 ARHGEF26Q96DR7 871 aa8.78□□□□□ -1
CHD8-213ENST00000557364 CASS4Q9NQ75 786 aa8.78□□□□□ -1
CHD8-213ENST00000557364 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.78□□□□□ -1
CHD8-213ENST00000557364 H2AFYO75367 372 aaKnown RBP8.78□□□□□ -1
CHD8-213ENST00000557364 BMP10O95393 424 aa8.78□□□□□ -1
CHD8-213ENST00000557364 RPA1P27694 616 aa8.78□□□□□ -1
CHD8-213ENST00000557364 TYK2P29597 1187 aa8.78□□□□□ -1
CHD8-213ENST00000557364 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -17e-7■■■■■ 30.4
CHD8-213ENST00000557364 CATSPER1Q8NEC5 780 aa8.78□□□□□ -1
CHD8-213ENST00000557364 NKX2-3Q8TAU0 364 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms